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Sample GSM1746 Query DataSets for GSM1746
Status Public on Jun 07, 2002
Title CF-1 wild type 5mo ovary
Sample type RNA
 
Source name wild type ovary from 5 month CF-1 mouse
Organism Mus musculus
Extracted molecule total RNA
 
Description Wild type ovary sample from 5 month old CF-1 mouse for use in gene expression profiling experiment on LH hypersecreting mice (LHCTP)
 
Submission date Jun 05, 2002
Last update date Mar 10, 2006
Contact name John H Nilson
E-mail(s) [email protected]
Phone 216-368-4497
Organization name Case Western Reserve University, School of Medicine
Department Pharmacology
Lab Nilson
Street address 2109 Adelbert Road
City Cleveland
State/province OH
ZIP/Postal code 44106
Country USA
 
Platform ID GPL75
Series (1)
GSE499 Granulosa cell tumorigenesis

Data table header descriptions
ID_REF
Positive positive probe pair
Negative negative probe pair
Pairs pairs
Pairs Used pairs used
Pairs InAvg pairs used in average
Pos Fraction positive probe pairs/total probe pairs
Log Avg log average ratio
Pos/Neg pos/neg
VALUE average difference
ABS_CALL present or absent or marginal

Data table
ID_REF Positive Negative Pairs Pairs Used Pairs InAvg Pos Fraction Log Avg Pos/Neg VALUE ABS_CALL
IL2_at 5 6 19 19 19 0.26 0.22 0.8 -217.2 A
IL10_at 8 5 20 20 19 0.4 1.45 1.6 111.6 A
GMCSF_at 5 7 20 20 18 0.25 -0.41 0.7 -242 A
TNFRII_at 8 3 20 20 18 0.4 1.3 2.7 63.7 A
MIP1-B_at 8 5 20 20 18 0.4 0.99 1.6 1702.6 A
IL4_at 7 7 20 20 18 0.35 1.1 1 60.5 A
IL12_P40_at 6 7 20 20 17 0.3 0.27 0.9 -92.4 A
TNFa_at 8 7 20 20 19 0.4 0.19 1.1 -53.4 A
TCRa_at 4 10 20 20 19 0.2 -1.09 0.4 -588.1 A
AFFX-BioB-5_at 11 4 20 20 19 0.55 2.29 2.8 544.8 A
AFFX-BioB-M_at 13 1 20 20 18 0.65 3.69 13 503.8 P
AFFX-BioB-3_at 11 2 20 20 19 0.55 2.21 5.5 654.2 P
AFFX-BioC-5_at 17 1 20 20 19 0.85 6.42 17 2713 P
AFFX-BioC-3_at 18 0 20 20 20 0.9 5.39 Undef 3281.9 P
AFFX-BioDn-5_at 17 1 20 20 19 0.85 6.36 17 2336.9 P
AFFX-BioDn-3_at 16 2 20 20 20 0.8 5.5 8 9611 P
AFFX-CreX-5_at 20 0 20 20 20 1 8.49 Undef 21281.1 P
AFFX-CreX-3_at 19 0 20 20 20 0.95 8.05 Undef 22586.2 P
AFFX-BioB-5_st 8 5 20 20 19 0.4 1.11 1.6 389.9 A
AFFX-BioB-M_st 6 7 20 20 18 0.3 -0.35 0.9 -269.7 A

Total number of rows: 6584

Table truncated, full table size 308 Kbytes.




Supplementary data files not provided
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