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Sample GSM1826518 Query DataSets for GSM1826518
Status Public on Dec 31, 2015
Title fibroblast_BRCA1mosMe_3
Sample type RNA
 
Source name fibroblast_BRCA1mosMe
Organism Homo sapiens
Characteristics disease: cancers
tissue: dermal fibroblast, untreated
Treatment protocol untreated
Growth protocol grown in DMEM + 10% FCS to subconfluency
Extracted molecule total RNA
Extraction protocol TriZol RNA extraction
Label biotin
Label protocol conducted by Affymetrix company
 
Hybridization protocol conducted by Affymetrix company
Scan protocol conducted by Affymetrix company
Data processing The data were analyzed with Affymetrix Expression Console with RMA normalization.
 
Submission date Jul 20, 2015
Last update date Dec 31, 2015
Contact name Anna Etzold
Organization name Universität Mainz
Street address Langenbeckstr. 1
City Mainz
State/province Germany (Deutschland)
ZIP/Postal code 55131
Country Germany
 
Platform ID GPL13667
Series (1)
GSE71078 Comparative expression analysis of BRCA1mosMe fibroblast vs. BRCA1wt fibroblasts

Data table header descriptions
ID_REF
VALUE log2-rma

Data table
ID_REF VALUE
AFFX-DapX-5_at 6.48434
AFFX-DapX-M_at 7.29476
AFFX-DapX-3_at 8.40447
AFFX-LysX-5_at 3.83633
AFFX-LysX-M_at 4.80995
AFFX-LysX-3_at 5.75822
AFFX-PheX-5_at 4.33213
AFFX-PheX-M_at 5.38267
AFFX-PheX-3_at 5.03657
AFFX-ThrX-5_at 4.93531
AFFX-ThrX-M_at 5.76493
AFFX-ThrX-3_at 6.81067
AFFX-TrpnX-5_at 3.1695
AFFX-TrpnX-M_at 3.43676
AFFX-TrpnX-3_at 3.05381
AFFX-r2-Ec-bioB-5_at 6.77351
AFFX-r2-Ec-bioB-M_at 7.26288
AFFX-r2-Ec-bioB-3_at 7.52451
AFFX-r2-Ec-bioC-5_at 9.00064
AFFX-r2-Ec-bioC-3_at 8.76071

Total number of rows: 49386

Table truncated, full table size 1033 Kbytes.




Supplementary file Size Download File type/resource
GSM1826518_A24ctrl3.ga.cel.gz 2.0 Mb (ftp)(http) CEL
GSM1826518_A24ctrl3.ga.rma.chp.gz 344.4 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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