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GEO accession:
Sample GSM206563
Query DataSets for GSM206563
Status
Public on Jun 30, 2007
Title
NB_bld_260
Sample type
genomic
Source name
matched blood
Organism
Homo sapiens
Characteristics
matched blood
Extracted molecule
genomic DNA
Extraction protocol
Quiagen DNA extraction protocol
Label
biotin
Label protocol
Affymetrix SNP array protocol
Hybridization protocol
Affymetrix SNP array protocol
Scan protocol
Hewlett-Packard scanner
Description
260B
Data processing
Affymetrix Gene chip 5.0 and www.dchipSNP.org (Cheng Li)
Submission date
Jun 29, 2007
Last update date
Aug 14, 2011
Contact name
Rani E. George
E-mail(s)
[email protected]
Phone
6176325281
Organization name
Dana-Farber Cancer Institute
Department
Pediatric Oncology
Lab
A. Thomas Look
Street address
Dana 322, 44 Binney St
City
Boston
State/province
MA
ZIP/Postal code
02115
Country
USA
Platform ID
GPL2641
Series (1)
GSE8333
SNP array analysis of neuroblastoma tumors
Data table header descriptions
ID_REF
Signal
VALUE
LOH calls
Data table
ID_REF
Signal
VALUE
AFFX-5Q-123
11116.6
NoCall
AFFX-5Q-456
9375.55
NoCall
AFFX-5Q-789
9854.91
NoCall
AFFX-5Q-ABC
12071.8
NoCall
SNP_A-1513509
2960.61
A
SNP_A-1518411
8470.33
AB
SNP_A-1511066
6186.26
AB
SNP_A-1517367
2657.5
A
SNP_A-1512567
8031.17
A
SNP_A-1519604
3061.64
A
SNP_A-1507932
1818.13
AB
SNP_A-1519685
4000.39
B
SNP_A-1516165
6709.93
AB
SNP_A-1514890
3189.39
B
SNP_A-1507580
2333.98
A
SNP_A-1510991
3040.95
A
SNP_A-1516205
4181.1
AB
SNP_A-1512666
1962.73
AB
SNP_A-1512740
9592.51
AB
SNP_A-1512132
2584.34
A
Total number of rows:
10208
Table truncated, full table size
242 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM206563.CEL.gz
3.0 Mb
(ftp)
(http)
CEL
GSM206563.TXT.gz
316.1 Kb
(ftp)
(http)
TXT
Processed data included within Sample table
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