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GEO accession:
Sample GSM206568
Query DataSets for GSM206568
Status
Public on Jun 30, 2007
Title
NB_tum_495
Sample type
genomic
Source name
neuroblastoma tumor
Organism
Homo sapiens
Characteristics
Stage 4, MYCN nonamplified, UH, diploid
Extracted molecule
genomic DNA
Extraction protocol
Quiagen DNA extraction protocol
Label
biotin
Label protocol
Affymetrix SNP array protocol
Hybridization protocol
Affymetrix SNP array protocol
Scan protocol
Hewlett-Packard scanner
Description
495T
Data processing
Affymetrix Gene chip 5.0 and www.dchipSNP.org (Cheng Li)
Submission date
Jun 29, 2007
Last update date
Aug 14, 2011
Contact name
Rani E. George
E-mail(s)
[email protected]
Phone
6176325281
Organization name
Dana-Farber Cancer Institute
Department
Pediatric Oncology
Lab
A. Thomas Look
Street address
Dana 322, 44 Binney St
City
Boston
State/province
MA
ZIP/Postal code
02115
Country
USA
Platform ID
GPL2641
Series (1)
GSE8333
SNP array analysis of neuroblastoma tumors
Data table header descriptions
ID_REF
Signal
VALUE
LOH calls
Data table
ID_REF
Signal
VALUE
AFFX-5Q-123
10929.4
NoCall
AFFX-5Q-456
8512.18
NoCall
AFFX-5Q-789
10708.1
NoCall
AFFX-5Q-ABC
13101.8
NoCall
SNP_A-1513509
2971.47
AB
SNP_A-1518411
11027.3
NoCall
SNP_A-1511066
5958.14
AB
SNP_A-1517367
2943.09
AB
SNP_A-1512567
6298.74
NoCall
SNP_A-1519604
3215.82
A
SNP_A-1507932
2091.74
A
SNP_A-1519685
3738.26
B
SNP_A-1516165
7416.95
AB
SNP_A-1514890
3147.59
B
SNP_A-1507580
3765.06
AB
SNP_A-1510991
4430.07
AB
SNP_A-1516205
4941.27
A
SNP_A-1512666
2250.4
B
SNP_A-1512740
7150.31
B
SNP_A-1512132
2765.34
A
Total number of rows:
10208
Table truncated, full table size
242 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM206568.CEL.gz
3.1 Mb
(ftp)
(http)
CEL
GSM206568.TXT.gz
314.8 Kb
(ftp)
(http)
TXT
Processed data included within Sample table
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