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GEO accession:
Sample GSM206573
Query DataSets for GSM206573
Status
Public on Jun 30, 2007
Title
NB_bld_1066
Sample type
genomic
Source name
matched blood
Organism
Homo sapiens
Characteristics
matched blood
Extracted molecule
genomic DNA
Extraction protocol
Quiagen DNA extraction protocol
Label
biotin
Label protocol
Affymetrix SNP array protocol
Hybridization protocol
Affymetrix SNP array protocol
Scan protocol
Hewlett-Packard scanner
Description
1066B
Data processing
Affymetrix Gene chip 5.0 and www.dchipSNP.org (Cheng Li)
Submission date
Jun 29, 2007
Last update date
Aug 14, 2011
Contact name
Rani E. George
E-mail(s)
[email protected]
Phone
6176325281
Organization name
Dana-Farber Cancer Institute
Department
Pediatric Oncology
Lab
A. Thomas Look
Street address
Dana 322, 44 Binney St
City
Boston
State/province
MA
ZIP/Postal code
02115
Country
USA
Platform ID
GPL2641
Series (1)
GSE8333
SNP array analysis of neuroblastoma tumors
Data table header descriptions
ID_REF
Signal
VALUE
LOH calls
Data table
ID_REF
Signal
VALUE
AFFX-5Q-123
8625.62
NoCall
AFFX-5Q-456
8116.54
NoCall
AFFX-5Q-789
9297.15
NoCall
AFFX-5Q-ABC
11323.2
NoCall
SNP_A-1513509
2650.92
AB
SNP_A-1518411
10671.3
NoCall
SNP_A-1511066
4154.28
A
SNP_A-1517367
1794.92
NoCall
SNP_A-1512567
3819.83
NoCall
SNP_A-1519604
3535.12
NoCall
SNP_A-1507932
2391.63
B
SNP_A-1519685
4168.1
B
SNP_A-1516165
4260.15
B
SNP_A-1514890
3736.31
B
SNP_A-1507580
3334.36
AB
SNP_A-1510991
4504.87
B
SNP_A-1516205
4278.54
A
SNP_A-1512666
2167.64
NoCall
SNP_A-1512740
6279.56
B
SNP_A-1512132
1764.28
A
Total number of rows:
10208
Table truncated, full table size
246 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM206573.CEL.gz
3.0 Mb
(ftp)
(http)
CEL
GSM206573.TXT.gz
315.4 Kb
(ftp)
(http)
TXT
Processed data included within Sample table
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