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Sample GSM2601240 Query DataSets for GSM2601240
Status Public on Jun 24, 2024
Title MOLM-16
Sample type RNA
 
Source name AMKL_cultured AML cell line
Organism Homo sapiens
Characteristics cell line: MOLM-16
cell type: Cultured AML cell line
cell subtype: AMKL
Extracted molecule total RNA
Extraction protocol Total RNA was extracted by Qiagen RNEasy kit according to the manufacturer's instructions.
Label Biotin
Label protocol Biotinylated aRNA were prepared according to the standard Affymetrix protocol from 200ng total RNA
 
Hybridization protocol Following fragmentation, 12.5 ug of aRNA were hybridized for 16 hr at 45C on GeneChip Human Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450
Scan protocol GeneChips were scanned using the Affymetrix Genechip Scanner 3000.
Description Gene expression data from cultured acute myeloid leukemia cell line.
Data processing Data were normalized by Robust Multichip Average (RMA) using R 3.3.1, Bioconductor Affy package ver 1.5
 
Submission date May 05, 2017
Last update date Jun 24, 2024
Contact name Tuan Zea Tan
E-mail(s) [email protected]
Organization name National University of Singapore
Department Cancer Science Institute Singapore
Street address 14 Medical Drive, #11-01, Singapore
City Singapore
ZIP/Postal code 117599
Country Singapore
 
Platform ID GPL570
Series (1)
GSE98578 Expression data from cultured human acute megokaryblastic myeloid leukemia and acute myeloid leukemia cell lines

Data table header descriptions
ID_REF
VALUE RMA signal intensity

Data table
ID_REF VALUE
1007_s_at 3.308894331
1053_at 9.07767393
117_at 4.262433093
121_at 6.421481716
1255_g_at 2.409114588
1294_at 6.722802322
1316_at 4.929260412
1320_at 2.832417852
1405_i_at 5.117560282
1431_at 3.635873818
1438_at 3.521274099
1487_at 7.289348766
1494_f_at 4.20941409
1552256_a_at 8.266920087
1552257_a_at 9.883838608
1552258_at 4.686351535
1552261_at 3.254267039
1552263_at 7.348128326
1552264_a_at 7.971878467
1552266_at 3.188784546

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM2601240_SM44.CEL.gz 4.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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