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Sample GSM2790288 Query DataSets for GSM2790288
Status Public on Sep 25, 2017
Title IL17RC_EPG03P1_KO mouse_colon_tumor_r2
Sample type RNA
 
Source name KO mouse_colon_tumor
Organism Mus musculus
Characteristics genotype: IL-17RC_KO
treatment: AOM+DSS
time: 63 days
disease state: Terminal
tissue: colon
Treatment protocol Mice were either left untreated or injected with 12g/KG of AOM followed by three cycles of 5-day oral 3% DSS water and 14 day regular water
Growth protocol 6-8 weeks old WT and IL-17RC KO mice
Extracted molecule total RNA
Extraction protocol Mice were sacrificed and colons were taken. Colon tissues were minced and homogenized and then lysed in TRIZol.
Label Biotin
Label protocol GeneChip HT 39 IVT Express Kit
 
Hybridization protocol GeneTitan
Scan protocol GeneTitan
Description Tumor
Data processing GeneTitan
 
Submission date Sep 22, 2017
Last update date Jan 23, 2018
Contact name Junjie Zhao
Organization name Cleveland Clinic Lerner Research Institute
Department Immunology
Lab Xiaoxia Li
Street address 9500 Euclid Avenue, NE4256
City Cleveland
State/province Ohio
ZIP/Postal code 44195
Country USA
 
Platform ID GPL11180
Series (1)
GSE104122 IMM_IL-17RC_KO mice_exp1

Data table header descriptions
ID_REF
VALUE GC-RMA signal

Data table
ID_REF VALUE
1415670_PM_at 491
1415671_PM_at 280
1415672_PM_at 781
1415673_PM_at 157
1415674_PM_a_at 522
1415675_PM_at 231
1415676_PM_a_at 1022
1415677_PM_at 280
1415678_PM_at 574
1415679_PM_at 1505
1415680_PM_at 357
1415681_PM_at 724
1415682_PM_at 93
1415683_PM_at 1043
1415684_PM_at 171
1415685_PM_at 219
1415686_PM_at 379
1415687_PM_a_at 913
1415688_PM_at 727
1415689_PM_s_at 233

Total number of rows: 45037

Table truncated, full table size 764 Kbytes.




Supplementary file Size Download File type/resource
GSM2790288_5500214110517010712224_G03.cel.gz 2.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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