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Sample GSM2818510 Query DataSets for GSM2818510
Status Public on Oct 19, 2017
Title vessel at T0, biological rep2
Sample type RNA
 
Source name Mouse vessel with no Angiotensin II treatmeant
Organism Mus musculus
Characteristics tissue: vessel
agent: none
time point: 0
stain: C57BL/6
Treatment protocol Mice were implanted with osmotic pumps (Alzet Model 1007D; Cupertino, CA,USA) and infused with Angiotensin II at 1500ng/kg/min in Ringer's solution (0.01mmol/L acetic acid in saline) for 1, 3, and 7 days . Systolic blood pressure was measured by the tail-cuff method before starting treatment and again every day after Angiotensin II infusion.
Growth protocol Eight to ten-week-old C57BL/6 male mice were kept at least 1 wk at 22°C and 55% relative humidity in a 12-h day/night lighting environment with free access to food and water.
Extracted molecule total RNA
Extraction protocol All mice were euthanized by an overdose of pentobarbital on days 1, 3 and 7 of Ang II treatment. Total RNA was isolated with TRIzol (Invitrogen) from vessels at each time point according to manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 1-8 ug total RNA
 
Hybridization protocol Following fragmentation, 10ug of cRNA were hybridized for 16 hr at 45℃ on GeneChip Affymetrix Mouse Transcriptome Array 1.0. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol Genechips were scanned by GeneChip® Scanner 3000.
Description Gene expression data from mouse vessel with no Angiotensin II treatmeant
Data processing The data were analyzed with Expression Console™, Version 1.3.1.
 
Submission date Oct 18, 2017
Last update date Jan 23, 2018
Contact name 李 玉琳
Organization name Beijing Institute of Heart Lung and Blood Vessel Diseases
Street address 2 Anzhen Rd, Chaoyang District,
City Beijing
ZIP/Postal code 100029
Country China
 
Platform ID GPL20775
Series (1)
GSE105114 Expression data from mouse tissue Angiotensin II treated for 0, 1, 3, 7 days

Data table header descriptions
ID_REF
VALUE log2-rma

Data table
ID_REF VALUE
AFFX-BkGr-GC03_st 6.13489
AFFX-BkGr-GC04_st 6.10192
AFFX-BkGr-GC05_st 5.76938
AFFX-BkGr-GC06_st 4.8739
AFFX-BkGr-GC07_st 4.31212
AFFX-BkGr-GC08_st 3.75693
AFFX-BkGr-GC09_st 3.3682
AFFX-BkGr-GC10_st 3.21892
AFFX-BkGr-GC11_st 2.89941
AFFX-BkGr-GC12_st 2.82166
AFFX-BkGr-GC13_st 2.64292
AFFX-BkGr-GC14_st 2.58414
AFFX-BkGr-GC15_st 2.54891
AFFX-BkGr-GC16_st 2.69638
AFFX-BkGr-GC17_st 2.71982
AFFX-BkGr-GC18_st 2.94521
AFFX-BkGr-GC19_st 3.32983
AFFX-BkGr-GC20_st 3.4914
AFFX-BkGr-GC21_st 3.67919
AFFX-BkGr-GC22_st 4.33625

Total number of rows: 72688

Table truncated, full table size 1859 Kbytes.




Supplementary file Size Download File type/resource
GSM2818510_Con-74.CEL.gz 21.8 Mb (ftp)(http) CEL
GSM2818510_Con-74.chp.gz 478.3 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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