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Sample GSM2818515 Query DataSets for GSM2818515
Status Public on Oct 19, 2017
Title vessel at T3, biological rep1
Sample type RNA
 
Source name Mouse vessel Angiotensin II treated for 3days
Organism Mus musculus
Characteristics tissue: vessel
agent: Angiotensin II
time point: 3 days
stain: C57BL/6
Treatment protocol Mice were implanted with osmotic pumps (Alzet Model 1007D; Cupertino, CA,USA) and infused with Angiotensin II at 1500ng/kg/min in Ringer's solution (0.01mmol/L acetic acid in saline) for 1, 3, and 7 days . Systolic blood pressure was measured by the tail-cuff method before starting treatment and again every day after Angiotensin II infusion.
Growth protocol Eight to ten-week-old C57BL/6 male mice were kept at least 1 wk at 22°C and 55% relative humidity in a 12-h day/night lighting environment with free access to food and water.
Extracted molecule total RNA
Extraction protocol All mice were euthanized by an overdose of pentobarbital on days 1, 3 and 7 of Ang II treatment. Total RNA was isolated with TRIzol (Invitrogen) from vessels at each time point according to manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 1-8 ug total RNA
 
Hybridization protocol Following fragmentation, 10ug of cRNA were hybridized for 16 hr at 45℃ on GeneChip Affymetrix Mouse Transcriptome Array 1.0. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol Genechips were scanned by GeneChip® Scanner 3000.
Description Gene expression data from mouse vessel Angiotensin II treated for 3days
Data processing The data were analyzed with Expression Console™, Version 1.3.1.
 
Submission date Oct 18, 2017
Last update date Jan 23, 2018
Contact name 李 玉琳
Organization name Beijing Institute of Heart Lung and Blood Vessel Diseases
Street address 2 Anzhen Rd, Chaoyang District,
City Beijing
ZIP/Postal code 100029
Country China
 
Platform ID GPL20775
Series (1)
GSE105114 Expression data from mouse tissue Angiotensin II treated for 0, 1, 3, 7 days

Data table header descriptions
ID_REF
VALUE log2-rma

Data table
ID_REF VALUE
AFFX-BkGr-GC03_st 6.22981
AFFX-BkGr-GC04_st 6.06119
AFFX-BkGr-GC05_st 5.7574
AFFX-BkGr-GC06_st 5.03299
AFFX-BkGr-GC07_st 4.40008
AFFX-BkGr-GC08_st 3.97094
AFFX-BkGr-GC09_st 3.4707
AFFX-BkGr-GC10_st 3.34078
AFFX-BkGr-GC11_st 3.02727
AFFX-BkGr-GC12_st 2.94148
AFFX-BkGr-GC13_st 2.75519
AFFX-BkGr-GC14_st 2.72028
AFFX-BkGr-GC15_st 2.68712
AFFX-BkGr-GC16_st 2.84675
AFFX-BkGr-GC17_st 2.86077
AFFX-BkGr-GC18_st 3.11341
AFFX-BkGr-GC19_st 3.54301
AFFX-BkGr-GC20_st 3.62847
AFFX-BkGr-GC21_st 3.81125
AFFX-BkGr-GC22_st 4.35679

Total number of rows: 72688

Table truncated, full table size 1859 Kbytes.




Supplementary file Size Download File type/resource
GSM2818515_A2-3d-60.CEL.gz 21.1 Mb (ftp)(http) CEL
GSM2818515_A2-3d-60.chp.gz 477.5 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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