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Sample GSM303978 Query DataSets for GSM303978
Status Public on Nov 21, 2008
Title SLE-7 #2 @42wks, asymptomatic on treatment with sirolimus (-2102085846)
Sample type RNA
 
Source name SLE-7 #2 @42wks
Organism Mus musculus
Characteristics Disease_status:asymptomatic on treatment with sirolimus
Gender:Female
Quality__3'/5'_Mean:1.31
Quality__Absent_(%):57.3
Quality__Absent_(%)_Dev.:0.74
Quality__Background_Mean_Dev.:0.05
Quality__Classification:Medium
Quality__Defective_Area_(%):0.33
Quality__Distortion_Severity:0.03
Quality__Gradient_Severity:0.02
Quality__Outlier_Area_(%):0.05
Quality__Scaling_Factor:0.2
Quality__Scaling_Factor_Dev.:0
RNA_source_key:-2102085846
Strain:NZB/W F1
Timepoint:42wks
Tissue:Kidney
Treatment:Rapamycin
Extracted molecule polyA RNA
Extraction protocol RNA was extracted from mouse kidney
Label biotin
Label protocol Affymetrix in-vitro labeling protocol
 
Hybridization protocol Affymetrix standard hybridization protocol
Scan protocol Affymetrix standard scan protocol
Description Cohort ID = 5:2000023014
Data processing Affymetrix MAS 5.0 algorithm
 
Submission date Jul 07, 2008
Last update date Nov 21, 2008
Contact name Padmalatha Reddy
E-mail(s) [email protected]
Organization name WYETH
Street address 35 Cambridgepark Drive
City Cambridge
State/province MA
ZIP/Postal code 02140
Country USA
 
Platform ID GPL75
Series (1)
GSE12024 Effect of Sirolimus treatment on lupus nephritis in NZB/W F1 female mice

Data table header descriptions
ID_REF Affymetrix Probeset
VALUE MAS 5.0 Signal value
DETECTION P-VALUE MAS 5.0 Detection p-value

Data table
ID_REF VALUE DETECTION P-VALUE
AA000151_at 61.036728 0.067678
AA004127_at 15.991646 0.52976
AA009039_at 65.218124 0.139482
AA014405_at 2.729037 0.979978
AA014745_at 32.484524 9.72E-4
AA014816_s_at 49.278946 0.216524
AA016480_at 2.942158 0.883887
AA016517_s_at 87.66658 0.250796
AA016609_at 20.476393 0.067678
AA023300_at 88.435287 0.001248
AA023445_at 111.941551 0.165861
AA023577_at 11.062679 0.860518
AA024154_s_at 46.233025 0.239063
AA027411_s_at 59.284187 0.123572
AA027702_at 121.588165 0.089478
AA028265_s_at 5.302201 0.957038
AA028280_at 18.741173 0.354453
AA028426_at 42.795799 0.574038
AA028728_s_at 8.904642 0.98333
AA030220_at 40.565334 0.083592

Total number of rows: 6584

Table truncated, full table size 203 Kbytes.




Supplementary file Size Download File type/resource
GSM303978.cel.gz 2.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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