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Sample GSM305567 Query DataSets for GSM305567
Status Public on Jan 08, 2009
Title AJC A35
Sample type RNA
 
Source name hepatic tissue, A/J, prenatal control
Organism Mus musculus
Characteristics male 7month old offspring
Treatment protocol pregnant mice were either treated as controls (C) and fed ad libitum for the duration of pregnancy or were treated as restricted (R) and subjected to undernutrition restriction diet. Whole mouse livers were extracted from 27 week old offspring from C or R treated mothers and flash frozen in liquid nitrogen.
Extracted molecule total RNA
Extraction protocol Total Hepatic RNA was extracted from the frozen tissue using RNeasy Mini Kits with on-column RNase-free DNase Kit digestion (Quigen)
Label Biotin
Label protocol standard protocols for Affymetrix GeneChip® Mouse Gene 1.0 ST Array
 
Hybridization protocol standard protocols for Affymetrix GeneChip® Mouse Gene 1.0 ST Array
Scan protocol standard protocols for Affymetrix GeneChip™3000 7G laser confocal slide scanner
Description no additional information
Data processing standard protocols for Affymetrix GeneChip® Mouse Gene 1.0 ST Array using Affymetrix Expression Console software
 
Submission date Jul 15, 2008
Last update date Dec 29, 2008
Contact name brian knight
E-mail(s) [email protected]
Phone 4165868224
Organization name samuel lunenfeld research institute
Street address 25 orde st
City toronto
ZIP/Postal code m5s3a6
Country Canada
 
Platform ID GPL6246
Series (1)
GSE12117 Role of inherent strain differences in prenatally induced differential metabolic syndrome phenotype and gene expression

Data table header descriptions
ID_REF
VALUE signal intensity in Affymetrix Expression Console was normalized using RMA algorithm

Data table
ID_REF VALUE
10338001 12.6932
10338003 11.38124
10338004 10.50511
10338017 13.3855
10338025 10.35604
10338026 13.62811
10338029 10.88279
10338035 10.11543
10338036 10.91774
10338037 4.005898
10338041 12.10286
10338042 11.49794
10338044 12.88713
10338047 7.514344
10338056 2.256261
10338059 13.53524
10338060 4.865832
10338063 3.121048
10338064 7.015148
10338065 7.570386

Total number of rows: 35512

Table truncated, full table size 620 Kbytes.




Supplementary file Size Download File type/resource
GSM305567.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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