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Sample GSM360103 Query DataSets for GSM360103
Status Public on Jan 15, 2009
Title heart_KO_rep3
Sample type RNA
 
Source name Heart, KO3
Organism Mus musculus
Characteristics Heart RNA
Biomaterial provider Harlan
Extracted molecule total RNA
Extraction protocol Trizol extraction
Label Biotin
Label protocol Ambion MessageAmp II-biotin enhanced kit (manufacturer's recommendations)
 
Hybridization protocol Performed according to the manufacturer's (Affymetrix) recommendations
Scan protocol Performed according to the manufacturer's (Affymetrix) recommendations
Description Heart, KO3
Data processing Raw intensities from the CEL files were analyzed using Affymetrix Power Tool (APT, version 1.8.5) to generate robust multi-array average intensity in log2 scale for each probe set. The perfect match intensities for each probe set were corrected for background and quantile-normalized using a robust fit of linear models.
 
Submission date Jan 13, 2009
Last update date Jan 14, 2009
Contact name Masaki Ieda
E-mail(s) [email protected]
Phone 415-734-2880
Organization name Gladstone Institute
Street address 1650 Owens street,
City San Francisco
State/province CA
ZIP/Postal code 94404
Country USA
 
Platform ID GPL6246
Series (2)
GSE14411 Gene expression in b1-integrin wild-type and knockout mouse heart
GSE14414 Gene expression in mouse heart

Data table header descriptions
ID_REF
VALUE log2Intensity

Data table
ID_REF VALUE
10473562 4.017
10385500 6.186
10593927 7.667
10457733 8.984
10476889 8.354
10438425 4.677
10442238 5.573
10539444 6.069
10424411 9.837
10565355 2.746
10362379 7.49
10461640 6.784
10398100 5.751
10517791 4.704
10578690 8.482
10442236 6.893
10399760 12.294
10418038 6.903
10578922 8.075
10442786 5.511

Total number of rows: 28767

Table truncated, full table size 420 Kbytes.




Supplementary file Size Download File type/resource
GSM360103.CEL.gz 4.4 Mb (ftp)(http) CEL
Processed data included within Sample table
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