GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM380314
Query DataSets for GSM380314
Status
Public on Jun 01, 2009
Title
Wild type 1
Sample type
RNA
Source name
Wild type
Organism
Mus musculus
Characteristics
genotype: Wild type
Extracted molecule
total RNA
Extraction protocol
RNA was isolated using Trizol reagent
Label
biotin
Label protocol
Affymetrix Whole-transcript Sense Target Labeling Assay (Rev3)
Hybridization protocol
per instructions of GeneChip Mouse gene 1.0 ST array
Scan protocol
Affymetrix Expression Console v1.1
Description
n/a
Data processing
RMA-sketch
Submission date
Mar 13, 2009
Last update date
Mar 13, 2009
Contact name
Lindsay Lovasco
E-mail(s)
[email protected]
Organization name
Brown University
Department
MCB
Lab
Freiman Lab
Street address
70 Ship St.
City
Providence
State/province
RI
ZIP/Postal code
02903
Country
USA
Platform ID
GPL6246
Series (1)
GSE15228
Gene expression differences between TAF4b-KO, Het and WT ovaries at 3 weeks of age
Data table header descriptions
ID_REF
VALUE
RMA signal
Data table
ID_REF
VALUE
10344614
73.8218
10344616
6.380576
10344620
14.01131
10344622
166.6367
10344624
777.3286
10344633
1400.971
10344637
337.7843
10344653
25.02913
10344658
463.9714
10344674
15.05078
10344679
46.27346
10344707
415.995
10344713
3134.288
10344715
14.28412
10344717
21.92478
10344719
73.07413
10344721
5.962114
10344723
1216.443
10344725
267.7408
10344741
3675.494
Total number of rows:
28266
Table truncated, full table size
493 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM380314.CEL.gz
4.2 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
