|
| Status |
Public on Apr 20, 2010 |
| Title |
Pusa Basmati 1 (Low grain number) replicate 1 |
| Sample type |
RNA |
| |
|
| Source name |
Panicle primordia stage '0'
|
| Organism |
Oryza sativa |
| Characteristics |
grain number: Low grain number per panicle
strain: Indica Group
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA was isolated using TRIzol Reagent (Sigma). RNA samples were processed as recommended by Affymetrix (Affymetrix geneChip Expression Analysis Technical manual; Affymetrix)
|
| Label |
biotin
|
| Label protocol |
Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 8 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
|
| |
|
| Hybridization protocol |
standard Affymetrix procedures
|
| Scan protocol |
standard Affymetrix procedures
|
| Description |
Gene expression profile of rice cultivar bearing low grain number in panicle
|
| Data processing |
GCOS 1.2
|
| |
|
| Submission date |
Apr 30, 2009 |
| Last update date |
Apr 20, 2010 |
| Contact name |
Rupesh Kailasrao Deshmukh |
| E-mail(s) |
[email protected]
|
| Phone |
09968886957
|
| Organization name |
National Research Center on Plant Biotechnology
|
| Department |
Rice Genome Laboratory
|
| Lab |
Rice Functional Genomics
|
| Street address |
Libraryavenue, PUSA
|
| City |
New Delhi |
| State/province |
Delhi |
| ZIP/Postal code |
110012 |
| Country |
India |
| |
|
| Platform ID |
GPL2025 |
| Series (1) |
| GSE15912 |
Whole genome transcriptome profiling of Pusa 1266 and Pusa Basmati 1 in panicle primordia stage |
|
