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Sample GSM41354 Query DataSets for GSM41354
Status Public on Feb 09, 2005
Title AdLacZ+E2-8 JMTM17
Sample type RNA
 
Source name MDA-MB-231
Organism Homo sapiens
Extracted molecule total RNA
 
Description Gene expression changes caused by estrogen treatment of breast cancer cells that re-express ERalpha was investigated by infecting ER-negative MDA-MB-231 breast cancer cells for 24 h with recombinant adenovirus encoding full-length human ERalpha (Ad-ERalpha) or control vector (Ad-LacZ), and treating them with 0ยท01% ethanol (vehicle control) or 10-8 M 17beta-estradiol (E2). After 48 h of treatment, total RNA was isolated and used for transcript profiling on Affymetrix GeneChips. Three independent biological replicates of this experiment were carried out.
 
Submission date Feb 07, 2005
Last update date Oct 28, 2005
Contact name Fei Ling Lim
E-mail(s) [email protected]
Phone +44 (0)1234222450
Organization name Unilever
Street address Colworth Science Park
City Sharnbrook
State/province Bedfordshire
ZIP/Postal code MK44 1LQ
Country United Kingdom
 
Platform ID GPL96
Series (1)
GSE2251 Anti-prolif. effect of E2 in breast cancer cells that re-exp. ERalpha is mediated by aberr. regulat. of cell cycle genes

Data table header descriptions
ID_REF
VALUE Microarray Suite 5.0 raw signal
ABS_CALL Microarray Suite 5.0 presence call - Present, Marginal, or Absent
DETECTION P-VALUE Microarray Suite 5.0 detection p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 270.5 P 0.01667
AFFX-BioB-M_at 282.7 P 0.001102
AFFX-BioB-3_at 133 P 0.018281
AFFX-BioC-5_at 608.2 P 0.000258
AFFX-BioC-3_at 424.4 P 0.000297
AFFX-BioDn-5_at 500.8 P 0.00034
AFFX-BioDn-3_at 3937.8 P 0.000297
AFFX-CreX-5_at 5513.9 P 0.000044
AFFX-CreX-3_at 9923.8 P 0.000044
AFFX-DapX-5_at 29.4 A 0.175328
AFFX-DapX-M_at 38.7 A 0.089478
AFFX-DapX-3_at 19.8 A 0.794268
AFFX-LysX-5_at 7.2 A 0.60308
AFFX-LysX-M_at 49.9 A 0.250796
AFFX-LysX-3_at 5.2 A 0.455413
AFFX-PheX-5_at 6.7 A 0.794268
AFFX-PheX-M_at 14.7 A 0.672921
AFFX-PheX-3_at 41.1 A 0.39692
AFFX-ThrX-5_at 6.7 A 0.794268
AFFX-ThrX-M_at 18.8 A 0.52976

Total number of rows: 22283

Table truncated, full table size 592 Kbytes.




Supplementary data files not provided

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