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Sample GSM5552053 Query DataSets for GSM5552053
Status Public on Sep 02, 2021
Title Naïve OT-I, biological replicate 4
Sample type RNA
 
Source name Naïve (CD44-CD62L+) CD8+ T cell
Organism Mus musculus
Characteristics gender: Female
tissue: Spleen
Treatment protocol In vivo influenza virus infection.
Extracted molecule total RNA
Extraction protocol Samples frozen in TRIReagent and total RNA was isolated using chloroform/isopropanol based extraction.
Label biotin
Label protocol Standard Affymetrix protocol
 
Hybridization protocol Standard Affymetrix protocol
Scan protocol Standard Affymetrix protocol
Description miRNA expression data in naïve OT-I CD8+ T cells
Data processing Data was normalized and analyzed using Affymetrix Expression Console (default settings) and miRBASE version 21.
 
Submission date Aug 31, 2021
Last update date Sep 03, 2021
Contact name Jennifer Hope
E-mail(s) [email protected]
Organization name Sanford Burnham Prebys Medical Discovery Institute
Street address 10901 N Torrey Pines Road
City La Jolla
State/province CA
ZIP/Postal code 92126
Country USA
 
Platform ID GPL21572
Series (1)
GSE183146 Evaluation of changes in microRNA expression in naïve and influenza-virus specific CD8+ T cells

Data table header descriptions
ID_REF
VALUE normalized
Detection p-value

Data table
ID_REF VALUE Detection p-value
20500235 9.411682 8.72E-16
20500236 1.044998 0.2416896
20500237 10.32531 8.72E-16
20500238 0.9490956 0.2593308
20500239 1.112735 0.4531522
20500240 0.9613842 0.5704405
20500241 10.98457 8.72E-16
20500242 0.7508192 0.335324
20500243 0.9152384 0.529171
20500244 11.13296 8.72E-16
20500245 1.787769 0.000122134
20500246 8.235625 8.72E-16
20500247 1.26139 0.3597361
20500248 2.954457 2.14E-09
20500249 5.575459 8.72E-16
20500250 0.9442658 0.1242691
20500251 7.562785 8.72E-16
20500252 3.123175 1.30E-07
20500253 0.7343622 0.7430285
20500254 0.9152384 0.9293814

Total number of rows: 3222

Table truncated, full table size 89 Kbytes.




Supplementary file Size Download File type/resource
GSM5552053_N4_miRNA-4_0_.CEL.gz 669.7 Kb (ftp)(http) CEL
Processed data included within Sample table

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