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Sample GSM5552058 Query DataSets for GSM5552058
Status Public on Sep 02, 2021
Title Effector OT-I, biological replicate 4
Sample type RNA
 
Source name Effector (CD44+CD62L-) CD8+ T cell
Organism Mus musculus
Characteristics gender: Female
tissue: Lung
Treatment protocol In vivo influenza virus infection.
Extracted molecule total RNA
Extraction protocol Samples frozen in TRIReagent and total RNA was isolated using chloroform/isopropanol based extraction.
Label biotin
Label protocol Standard Affymetrix protocol
 
Hybridization protocol Standard Affymetrix protocol
Scan protocol Standard Affymetrix protocol
Description miRNA expression data in anti-influenza effector OT-I CD8+ T cells
Data processing Data was normalized and analyzed using Affymetrix Expression Console (default settings) and miRBASE version 21.
 
Submission date Aug 31, 2021
Last update date Sep 03, 2021
Contact name Jennifer Hope
E-mail(s) [email protected]
Organization name Sanford Burnham Prebys Medical Discovery Institute
Street address 10901 N Torrey Pines Road
City La Jolla
State/province CA
ZIP/Postal code 92126
Country USA
 
Platform ID GPL21572
Series (1)
GSE183146 Evaluation of changes in microRNA expression in naïve and influenza-virus specific CD8+ T cells

Data table header descriptions
ID_REF
VALUE normalized
Detection p-value

Data table
ID_REF VALUE Detection p-value
20500235 8.037129 8.72E-16
20500236 0.5401818 0.9936858
20500237 10.88707 8.72E-16
20500238 1.183132 0.3499855
20500239 1.392595 0.261733
20500240 1.052216 0.2563635
20500241 10.63409 8.72E-16
20500242 0.6322979 0.8156101
20500243 2.306039 0.000601978
20500244 12.02449 8.72E-16
20500245 4.90223 5.28E-10
20500246 9.051666 8.72E-16
20500247 1.737656 0.004555777
20500248 1.447329 0.03504336
20500249 4.726121 1.11E-11
20500250 1.651022 0.008138852
20500251 4.996106 2.55E-14
20500252 3.114324 1.13E-07
20500253 1.168494 0.1157471
20500254 1.024968 0.4287947

Total number of rows: 3222

Table truncated, full table size 89 Kbytes.




Supplementary file Size Download File type/resource
GSM5552058_E4_miRNA-4_0_.CEL.gz 676.2 Kb (ftp)(http) CEL
Processed data included within Sample table

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