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Sample GSM5849899 Query DataSets for GSM5849899
Status Public on Feb 01, 2022
Title wildtype_DMSO_1 [N2 1]
Sample type RNA
 
Source name 3-days old C. elegans treated with 0.1% DMSO from eggs until day 3
Organism Caenorhabditis elegans
Characteristics strain: N2
genotype: wildtype
treatment: 0.1% DMSO from eggs until day 3
Growth protocol nematodes were grown on NGM plates supplemented with either 0.1% DMSO or 100 µM curcumin from eggs to day 3
Extracted molecule total RNA
Extraction protocol after disruption of the worms using a Tissue Lyser the total RNA was extracted using the Rneasy kit (Qiagen, Hilden, Germany)
Label biotin
Label protocol Samples were prepared and hybridized to C. elegans Gene 1.0 ST Microarray according to Affymetrix specifications.
 
Hybridization protocol Samples were prepared and hybridized to C. elegans Gene 1.0 ST Microarray according to Affymetrix specifications.
Scan protocol The tiling arrays were scanned using an Affymetrix GeneChip Scanner 3000 7G according to manufacturer's instruction.
Data processing RMA normalization; normalized also per gene to the median
 
Submission date Jan 31, 2022
Last update date Feb 01, 2022
Contact name Vanessa Brinkmann
E-mail(s) [email protected]
Organization name IUF- Leibniz Research Institute for Environmental Medicine
Lab Ventura Lab
Street address Auf'm Hennekamp 50
City Düsseldorf
State/province NRW
ZIP/Postal code 40225
Country Germany
 
Platform ID GPL19230
Series (1)
GSE195769 Aryl hydrocarbon receptor-dependent and -independent pathways mediate curcumin anti-aging effects

Data table header descriptions
ID_REF
VALUE RMA value, normalized to median

Data table
ID_REF VALUE
18450001 3.140228644
18450003 5.854078541
18450005 2.512289325
18450007 6.230865627
18450009 6.074380939
18450011 2.483352535
18450013 3.640045839
18450015 6.410807509
18450019 1.860506995
18450021 4.789426608
18450023 2.464520711
18450025 5.409120017
18450027 2.871222073
18450029 3.542003569
18450031 2.130929421
18450033 2.786041989
18450035 2.441931585
18450037 4.718374653
18450039 3.951072067
18450041 1.928814601

Total number of rows: 29317

Table truncated, full table size 598 Kbytes.




Supplementary file Size Download File type/resource
GSM5849899_77-N2_1_EleGene-1_0-st.CEL.gz 4.7 Mb (ftp)(http) CEL
Processed data included within Sample table
Processed data are available on Series record

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