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Sample GSM5849916 Query DataSets for GSM5849916
Status Public on Feb 01, 2022
Title ahr-1(ju145)_100µM curcumin_3 [ahr C3]
Sample type RNA
 
Source name 3-days old C. elegans treated with 100µM curcumin from eggs until day 3
Organism Caenorhabditis elegans
Characteristics strain: CZ2485
genotype: ahr-1(ju145)
treatment: 100uM curcumin from eggs until day 3
Growth protocol nematodes were grown on NGM plates supplemented with either 0.1% DMSO or 100 µM curcumin from eggs to day 3
Extracted molecule total RNA
Extraction protocol after disruption of the worms using a Tissue Lyser the total RNA was extracted using the Rneasy kit (Qiagen, Hilden, Germany)
Label biotin
Label protocol Samples were prepared and hybridized to C. elegans Gene 1.0 ST Microarray according to Affymetrix specifications.
 
Hybridization protocol Samples were prepared and hybridized to C. elegans Gene 1.0 ST Microarray according to Affymetrix specifications.
Scan protocol The tiling arrays were scanned using an Affymetrix GeneChip Scanner 3000 7G according to manufacturer's instruction.
Data processing RMA normalization; normalized also per gene to the median
 
Submission date Jan 31, 2022
Last update date Feb 01, 2022
Contact name Vanessa Brinkmann
E-mail(s) [email protected]
Organization name IUF- Leibniz Research Institute for Environmental Medicine
Lab Ventura Lab
Street address Auf'm Hennekamp 50
City Düsseldorf
State/province NRW
ZIP/Postal code 40225
Country Germany
 
Platform ID GPL19230
Series (1)
GSE195769 Aryl hydrocarbon receptor-dependent and -independent pathways mediate curcumin anti-aging effects

Data table header descriptions
ID_REF
VALUE RMA value, normalized to median

Data table
ID_REF VALUE
18450001 3.237389011
18450003 6.321482322
18450005 3.403897104
18450007 5.665629777
18450009 6.483228607
18450011 2.836215713
18450013 2.239629715
18450015 6.052606866
18450019 2.78210357
18450021 2.517504241
18450023 2.609513626
18450025 4.745153888
18450027 2.653471577
18450029 3.329079098
18450031 2.715320617
18450033 3.115076517
18450035 2.931336307
18450037 5.202830383
18450039 3.882848814
18450041 2.916454917

Total number of rows: 29317

Table truncated, full table size 597 Kbytes.




Supplementary file Size Download File type/resource
GSM5849916_77-ahr_C3_EleGene-1_0-st.CEL.gz 4.7 Mb (ftp)(http) CEL
Processed data included within Sample table
Processed data are available on Series record

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