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Sample GSM641876 Query DataSets for GSM641876
Status Public on Feb 16, 2011
Title 3A9 into IP-HEL (8 hrs.)
Sample type RNA
 
Source name pancreatic islets of Langerhans, 3A9 T cell transfer into insulin promoter HEL transgenic strain, 8 hrs.
Organism Mus musculus
Characteristics genotype/variation: insulin promoter HEL transgenic
strain: B10.BR
organ: Pancreas
Extracted molecule total RNA
Extraction protocol Ambion RNAqeuous Micro Kit
Label Biotin
Label protocol Affymetrix® GeneChip® WT Sense Target Labeling
 
Hybridization protocol Affymetrix GeneChip® Fluidics Station 450
Scan protocol Affymetrix GeneChip® Scanner 3000 7G, GCOS
Data processing GCOS, Expression Console, and DNAStar Arraystar 4.0
affymetrix-algorithm-name = RMA
affymetrix-algorithm-version = 1.0
affymetrix-algorithm-param-Background correction method = RMA Background Correction
affymetrix-algorithm-param-Normalization method = Quantile
affymetrix-algorithm-param-Summarization method = Median polish
 
Submission date Dec 17, 2010
Last update date Feb 16, 2011
Contact name Emil Unanue
E-mail(s) [email protected]
Organization name Washington University School of Medicine
Department Pathology and Immunology
Street address 660 S Euclid Ave Box 8118
City Saint Louis
State/province MO
ZIP/Postal code 63110
Country USA
 
Platform ID GPL6246
Series (1)
GSE26147 Examination of inflammatory transcripts during a transfer model of type I diabetes.

Data table header descriptions
ID_REF
VALUE normalized data

Data table
ID_REF VALUE
10338001 4112.83
10338002 77.33
10338003 752.733
10338004 394.345
10338005 3.11952
10338006 3.99918
10338007 5.73222
10338008 12.6876
10338009 368.174
10338010 3.30559
10338011 52.3199
10338012 3.66435
10338013 2.88113
10338014 3.07282
10338015 2.90417
10338016 203.652
10338017 9865.92
10338018 108.399
10338019 35.6444
10338020 375.091

Total number of rows: 35556

Table truncated, full table size 586 Kbytes.




Supplementary file Size Download File type/resource
GSM641876.CEL.gz 4.1 Mb (ftp)(http) CEL
GSM641876.chp.gz 219.2 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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