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Sample GSM641878 Query DataSets for GSM641878
Status Public on Feb 16, 2011
Title 3A9 into IP-HEL (24 hrs.) 2
Sample type RNA
 
Source name pancreatic islets of Langerhans, 3A9 T cell transfer into insulin promoter HEL transgenic strain, 24 hrs.
Organism Mus musculus
Characteristics genotype/variation: insulin promoter HEL transgenic
strain: B10.BR
organ: Pancreas
Extracted molecule total RNA
Extraction protocol Ambion RNAqeuous Micro Kit
Label Biotin
Label protocol Affymetrix® GeneChip® WT Sense Target Labeling
 
Hybridization protocol Affymetrix GeneChip® Fluidics Station 450
Scan protocol Affymetrix GeneChip® Scanner 3000 7G, GCOS
Data processing GCOS, Expression Console, and DNAStar Arraystar 4.0
affymetrix-algorithm-name = RMA
affymetrix-algorithm-version = 1.0
affymetrix-algorithm-param-Background correction method = RMA Background Correction
affymetrix-algorithm-param-Normalization method = Quantile
affymetrix-algorithm-param-Summarization method = Median polish
 
Submission date Dec 17, 2010
Last update date Feb 16, 2011
Contact name Emil Unanue
E-mail(s) [email protected]
Organization name Washington University School of Medicine
Department Pathology and Immunology
Street address 660 S Euclid Ave Box 8118
City Saint Louis
State/province MO
ZIP/Postal code 63110
Country USA
 
Platform ID GPL6246
Series (1)
GSE26147 Examination of inflammatory transcripts during a transfer model of type I diabetes.

Data table header descriptions
ID_REF
VALUE normalized data

Data table
ID_REF VALUE
10338001 6293.32
10338002 182.009
10338003 1838.61
10338004 991.791
10338005 3.64123
10338006 4.80277
10338007 8.33462
10338008 23.5064
10338009 1184.11
10338010 3.68009
10338011 114.519
10338012 4.19079
10338013 2.9982
10338014 3.2749
10338015 3.16883
10338016 529.45
10338017 8797.73
10338018 266.711
10338019 75.9867
10338020 1099.81

Total number of rows: 35556

Table truncated, full table size 586 Kbytes.




Supplementary file Size Download File type/resource
GSM641878.CEL.gz 4.0 Mb (ftp)(http) CEL
GSM641878.chp.gz 218.9 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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