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Sample GSM648296 Query DataSets for GSM648296
Status Public on Jul 01, 2011
Title PTEN+/-IKK2ca/ca ep_B
Sample type RNA
 
Source name lateral prostate, PTEN+/- IKK2ca/ca epithelium, 12 months
Organism Mus musculus
Characteristics strain: C57BL/6
genotype: PTEN+/- IKK2ca/ca (epithelium)
age: 12 months
tissue: lateral prostate
Extracted molecule total RNA
Extraction protocol Lateral prostates were dissected from euthanized mice at 12 months of age by use of a stereomicroscope and placed in RNAlater solution. Tissues were homogenized using a Polytron homogenizer. Total RNA was extrected using RNeasy (QIAGEN).
Label biotin
Label protocol According to standard Affymetrix protocol.
 
Hybridization protocol According to standard Affymetrix protocol.
Scan protocol According to standard Affymetrix protocol.
Description 928
Gene expression data from PTEN+/- IKK2ca/ca (ep) lateral prostate.
Data processing RMA analysis using Affymetrix Expression Console 1.1.
 
Submission date Jan 03, 2011
Last update date Jul 01, 2011
Contact name Andreas Birbach
E-mail(s) [email protected]
Organization name Medical University of Vienna
Department Vascular Biology and Thrombosis Research
Street address Schwarzspanierstrasse 17
City Vienna
ZIP/Postal code 1090
Country Austria
 
Platform ID GPL6246
Series (1)
GSE26410 Inflammation leads to loss of smooth muscle cells but fails to induce invasiveness in a prostate tumor model

Data table header descriptions
ID_REF
VALUE Log2 RMA signal

Data table
ID_REF VALUE
10449000 12.02367
10523120 10.106
10502565 8.407138
10557470 5.327536
10429520 11.9768
10581605 9.861164
10385083 10.31164
10523145 10.98283
10491091 9.868024
10452316 11.98963
10415081 10.41819
10520121 10.41819
10578405 10.41819
10586076 10.41819
10439087 8.159873
10416689 13.17027
10430006 11.64927
10583071 6.273832
10400304 9.730166
10388254 9.408915

Total number of rows: 28815

Table truncated, full table size 503 Kbytes.




Supplementary file Size Download File type/resource
GSM648296.CEL.gz 4.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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