|
| Status |
Public on Sep 06, 2006 |
| Title |
Neuroblastoma tumor 88003 (GPL96) |
| Sample type |
RNA |
| |
|
| Source name |
Neuroblastoma tumor obtained at diagnosis
|
| Organism |
Homo sapiens |
| Characteristics |
Patient without disease relapse (minimum of 5 years from diagnosis)
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Approximately 15 sections were obtained from snap frozen tissue (at diagnosis or relapse) and total RNA was extracted from the tissue lysate using an RNeasy kit (Qiagen).
|
| Label |
biotin
|
| Label protocol |
Approximately 15 µg of total RNA was processed to produce biotinylated cRNA targets.
|
| |
|
| Hybridization protocol |
standard Affymetrix procedures
|
| Scan protocol |
standard Affymetrix procedures
|
| Description |
Neuroblastoma tumor
|
| Data processing |
dCHIP (PM-MM model)
|
| |
|
| Submission date |
Oct 13, 2005 |
| Last update date |
May 31, 2006 |
| Contact name |
Shahab Asgharzadeh |
| E-mail(s) |
[email protected]
|
| Phone |
310-669-2121
|
| Fax |
310-664-9455
|
| Organization name |
Childrens Hospital Los Angeles
|
| Department |
Hematology-Oncology
|
| Lab |
Neural Tumors Laboratory
|
| Street address |
4650 Sunset Boulevard, Mail Stop #57
|
| City |
Los Angeles |
| State/province |
CA |
| ZIP/Postal code |
90027 |
| Country |
USA |
| |
|
| Platform ID |
GPL96 |
| Series (1) |
| GSE3446 |
Gene expression profiles of primary tumors from patients with metastatic neuroblastoma lacking MYCN amplification |
|
