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Sample GSM792726 Query DataSets for GSM792726
Status Public on Oct 03, 2011
Title Cerebellum 2 copies biological 3 technical 2
Sample type RNA
 
Source name Cerebellum Dosage 2
Organism Mus musculus
Characteristics mouse id: 90
chromosome_dosage: +/+
brain region: Cerebellum
strain: F1 C57BL/6N: 129Sv
gender: male
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol The samples were amplified and converted to cDNA using the Whole Transcript Expression kit (Ambion), fragmented and labeled using the Whole Transcript Sense Target Labeling Assay (Affymetrix)
 
Hybridization protocol The arrays were hybridized and washed using the FS450 fluidics station (Affymetrix)
Scan protocol scanned using the GCS300 7G GeneChip Scanner (Affymetrix)
Description Mus Musculus Cerebellum Dosage 2
Data processing Data was extracted using Expression Console (Affymetrix) with the RMA sketch workflow for gene level analysis
 
Submission date Sep 09, 2011
Last update date Oct 03, 2011
Contact name Guy Horev
Organization name Cold Spring Harbor Laboratory
Street address 1 Bungtown Road
City Cold Spring Harbor
State/province New York
ZIP/Postal code 11743
Country USA
 
Platform ID GPL6246
Series (1)
GSE32012 Dosage-dependent phenotypes in models of 16p11.2 lesions found in autism

Data table header descriptions
ID_REF
VALUE Log2 values of the intensity

Data table
ID_REF VALUE
10344614 7.355717
10344616 3.841474
10344620 5.215198
10344622 8.546312
10344624 10.45092
10344633 10.62463
10344637 10.15397
10344653 6.044587
10344658 9.987064
10344674 4.731252
10344679 11.17377
10344707 10.45032
10344713 9.157629
10344715 5.09124
10344717 4.138635
10344719 6.738067
10344721 3.806087
10344723 7.304622
10344725 8.579844
10344741 10.53952

Total number of rows: 35556

Table truncated, full table size 621 Kbytes.




Supplementary file Size Download File type/resource
GSM792726_AMGH100609_WT-90-CEREB_121709.CEL.gz 4.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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