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GEO accession:
Sample GSM802270
Query DataSets for GSM802270
Status
Public on Nov 01, 2011
Title
12-HdhQ150-462
Sample type
RNA
Source name
12 month, HdhQ150, F
Organism
Mus musculus
Characteristics
genotype/variation: HdhQ150
age: 12 month
gender: F
strain: 129/Ola x C57BL6/J
tissue: caudate nucleus
Treatment protocol
Not applicable
Growth protocol
Not applicable
Extracted molecule
total RNA
Extraction protocol
TRIzol-chloroform extraction
Label
biotin
Label protocol
WT labeling kit (www.affymetrix.com)
Hybridization protocol
According to standard Affymetrix protocol
Scan protocol
According to standard Affymetrix protocol
Description
Expression data from 12 month, HdhQ150 mouse
Data processing
The data were analyzed with Affymetrix Expression Console using the RMA algorithm
Submission date
Sep 27, 2011
Last update date
Nov 01, 2011
Contact name
Peter Giles
E-mail(s)
[email protected]
Organization name
Cardiff University
Street address
Heath Park
City
CARDIFF
ZIP/Postal code
CF14 4XN
Country
United Kingdom
Platform ID
GPL6246
Series (1)
GSE32417
Longitudinal analysis of gene expression and behaviour in the HdhQ150 mouse model of HD
Data table header descriptions
ID_REF
VALUE
log2 RMA
Data table
ID_REF
VALUE
10338001
12.0742
10338002
6.42881
10338003
10.4866
10338004
9.2848
10338005
1.75166
10338006
1.99233
10338007
2.76679
10338008
4.11832
10338009
7.57381
10338010
1.78694
10338011
5.98728
10338012
1.90484
10338013
1.58686
10338014
1.68283
10338015
1.64235
10338016
7.41064
10338017
13.2478
10338018
6.85272
10338019
5.56782
10338020
7.64938
Total number of rows:
35556
Table truncated, full table size
586 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM802270_462.CEL.gz
4.2 Mb
(ftp)
(http)
CEL
GSM802270_462.rma-gene-default.chp.gz
269.9 Kb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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