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GEO accession:
Sample GSM802272
Query DataSets for GSM802272
Status
Public on Nov 01, 2011
Title
12-HdhQ150-487
Sample type
RNA
Source name
12 month, HdhQ150, F
Organism
Mus musculus
Characteristics
genotype/variation: HdhQ150
age: 12 month
gender: F
strain: 129/Ola x C57BL6/J
tissue: caudate nucleus
Treatment protocol
Not applicable
Growth protocol
Not applicable
Extracted molecule
total RNA
Extraction protocol
TRIzol-chloroform extraction
Label
biotin
Label protocol
WT labeling kit (www.affymetrix.com)
Hybridization protocol
According to standard Affymetrix protocol
Scan protocol
According to standard Affymetrix protocol
Description
Expression data from 12 month, HdhQ150 mouse
Data processing
The data were analyzed with Affymetrix Expression Console using the RMA algorithm
Submission date
Sep 27, 2011
Last update date
Nov 01, 2011
Contact name
Peter Giles
E-mail(s)
[email protected]
Organization name
Cardiff University
Street address
Heath Park
City
CARDIFF
ZIP/Postal code
CF14 4XN
Country
United Kingdom
Platform ID
GPL6246
Series (1)
GSE32417
Longitudinal analysis of gene expression and behaviour in the HdhQ150 mouse model of HD
Data table header descriptions
ID_REF
VALUE
log2 RMA
Data table
ID_REF
VALUE
10338001
11.7775
10338002
6.46056
10338003
10.2258
10338004
8.90331
10338005
1.79268
10338006
2.19454
10338007
3.02542
10338008
4.3104
10338009
7.64608
10338010
1.84933
10338011
5.98303
10338012
1.97037
10338013
1.69062
10338014
1.69516
10338015
1.67664
10338016
7.2988
10338017
12.8385
10338018
6.79572
10338019
5.59822
10338020
7.64331
Total number of rows:
35556
Table truncated, full table size
586 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM802272_487.CEL.gz
4.1 Mb
(ftp)
(http)
CEL
GSM802272_487.rma-gene-default.chp.gz
270.0 Kb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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