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GEO accession:
Sample GSM802279
Query DataSets for GSM802279
Status
Public on Nov 01, 2011
Title
18-HdhQ150-383
Sample type
RNA
Source name
18 month, HdhQ150, F
Organism
Mus musculus
Characteristics
genotype/variation: HdhQ150
age: 18 month
gender: F
strain: 129/Ola x C57BL6/J
tissue: caudate nucleus
Treatment protocol
Not applicable
Growth protocol
Not applicable
Extracted molecule
total RNA
Extraction protocol
TRIzol-chloroform extraction
Label
biotin
Label protocol
WT labeling kit (www.affymetrix.com)
Hybridization protocol
According to standard Affymetrix protocol
Scan protocol
According to standard Affymetrix protocol
Description
Expression data from 18 month, HdhQ150 mouse
Data processing
The data were analyzed with Affymetrix Expression Console using the RMA algorithm
Submission date
Sep 27, 2011
Last update date
Nov 01, 2011
Contact name
Peter Giles
E-mail(s)
[email protected]
Organization name
Cardiff University
Street address
Heath Park
City
CARDIFF
ZIP/Postal code
CF14 4XN
Country
United Kingdom
Platform ID
GPL6246
Series (1)
GSE32417
Longitudinal analysis of gene expression and behaviour in the HdhQ150 mouse model of HD
Data table header descriptions
ID_REF
VALUE
log2 RMA
Data table
ID_REF
VALUE
10338001
12.2019
10338002
6.58741
10338003
10.7406
10338004
9.45814
10338005
1.89236
10338006
2.32757
10338007
3.22735
10338008
4.47991
10338009
8.05081
10338010
1.9707
10338011
6.12026
10338012
2.06217
10338013
1.69756
10338014
1.78145
10338015
1.74557
10338016
7.62255
10338017
13.1028
10338018
7.03291
10338019
5.76443
10338020
8.04523
Total number of rows:
35556
Table truncated, full table size
586 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM802279_383.CEL.gz
4.0 Mb
(ftp)
(http)
CEL
GSM802279_383.rma-gene-default.chp.gz
269.9 Kb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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