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GEO accession:
Sample GSM802282
Query DataSets for GSM802282
Status
Public on Nov 01, 2011
Title
18-HdhQ150-426
Sample type
RNA
Source name
18 month, HdhQ150, F
Organism
Mus musculus
Characteristics
genotype/variation: HdhQ150
age: 18 month
gender: F
strain: 129/Ola x C57BL6/J
tissue: caudate nucleus
Treatment protocol
Not applicable
Growth protocol
Not applicable
Extracted molecule
total RNA
Extraction protocol
TRIzol-chloroform extraction
Label
biotin
Label protocol
WT labeling kit (www.affymetrix.com)
Hybridization protocol
According to standard Affymetrix protocol
Scan protocol
According to standard Affymetrix protocol
Description
Expression data from 18 month, HdhQ150 mouse
Data processing
The data were analyzed with Affymetrix Expression Console using the RMA algorithm
Submission date
Sep 27, 2011
Last update date
Nov 01, 2011
Contact name
Peter Giles
E-mail(s)
[email protected]
Organization name
Cardiff University
Street address
Heath Park
City
CARDIFF
ZIP/Postal code
CF14 4XN
Country
United Kingdom
Platform ID
GPL6246
Series (1)
GSE32417
Longitudinal analysis of gene expression and behaviour in the HdhQ150 mouse model of HD
Data table header descriptions
ID_REF
VALUE
log2 RMA
Data table
ID_REF
VALUE
10338001
11.5459
10338002
6.53987
10338003
9.88753
10338004
8.6589
10338005
1.94632
10338006
2.2848
10338007
3.08522
10338008
4.36222
10338009
7.81552
10338010
1.9286
10338011
6.04833
10338012
2.05663
10338013
1.69907
10338014
1.82425
10338015
1.73396
10338016
7.46294
10338017
12.9449
10338018
6.91338
10338019
5.70945
10338020
7.81309
Total number of rows:
35556
Table truncated, full table size
586 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM802282_426.CEL.gz
4.1 Mb
(ftp)
(http)
CEL
GSM802282_426.rma-gene-default.chp.gz
269.9 Kb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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