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GEO accession:
Sample GSM802288
Query DataSets for GSM802288
Status
Public on Nov 01, 2011
Title
6-HdhQ150-1003
Sample type
RNA
Source name
6 month, HdhQ150, M
Organism
Mus musculus
Characteristics
genotype/variation: HdhQ150
age: 6 month
gender: M
strain: 129/Ola x C57BL6/J
tissue: caudate nucleus
Treatment protocol
Not applicable
Growth protocol
Not applicable
Extracted molecule
total RNA
Extraction protocol
TRIzol-chloroform extraction
Label
biotin
Label protocol
WT labeling kit (www.affymetrix.com)
Hybridization protocol
According to standard Affymetrix protocol
Scan protocol
According to standard Affymetrix protocol
Description
Expression data from 6 month, HdhQ150 mouse
Data processing
The data were analyzed with Affymetrix Expression Console using the RMA algorithm
Submission date
Sep 27, 2011
Last update date
Nov 01, 2011
Contact name
Peter Giles
E-mail(s)
[email protected]
Organization name
Cardiff University
Street address
Heath Park
City
CARDIFF
ZIP/Postal code
CF14 4XN
Country
United Kingdom
Platform ID
GPL6246
Series (1)
GSE32417
Longitudinal analysis of gene expression and behaviour in the HdhQ150 mouse model of HD
Data table header descriptions
ID_REF
VALUE
log2 RMA
Data table
ID_REF
VALUE
10338001
11.8857
10338002
6.62084
10338003
10.319
10338004
9.20114
10338005
1.85725
10338006
2.24753
10338007
3.05936
10338008
4.36222
10338009
7.85059
10338010
1.91417
10338011
6.16404
10338012
2.06217
10338013
1.66101
10338014
1.75802
10338015
1.71142
10338016
7.59085
10338017
13.1846
10338018
7.02936
10338019
5.76355
10338020
7.90292
Total number of rows:
35556
Table truncated, full table size
586 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM802288_1003.CEL.gz
4.2 Mb
(ftp)
(http)
CEL
GSM802288_1003.rma-gene-default.chp.gz
270.0 Kb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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