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GEO accession:
Sample GSM802290
Query DataSets for GSM802290
Status
Public on Nov 01, 2011
Title
6-HdhQ150-1017
Sample type
RNA
Source name
6 month, HdhQ150, F
Organism
Mus musculus
Characteristics
genotype/variation: HdhQ150
age: 6 month
gender: F
strain: 129/Ola x C57BL6/J
tissue: caudate nucleus
Treatment protocol
Not applicable
Growth protocol
Not applicable
Extracted molecule
total RNA
Extraction protocol
TRIzol-chloroform extraction
Label
biotin
Label protocol
WT labeling kit (www.affymetrix.com)
Hybridization protocol
According to standard Affymetrix protocol
Scan protocol
According to standard Affymetrix protocol
Description
Expression data from 6 month, HdhQ150 mouse
Data processing
The data were analyzed with Affymetrix Expression Console using the RMA algorithm
Submission date
Sep 27, 2011
Last update date
Nov 01, 2011
Contact name
Peter Giles
E-mail(s)
[email protected]
Organization name
Cardiff University
Street address
Heath Park
City
CARDIFF
ZIP/Postal code
CF14 4XN
Country
United Kingdom
Platform ID
GPL6246
Series (1)
GSE32417
Longitudinal analysis of gene expression and behaviour in the HdhQ150 mouse model of HD
Data table header descriptions
ID_REF
VALUE
log2 RMA
Data table
ID_REF
VALUE
10338001
12.0607
10338002
6.77528
10338003
10.5543
10338004
9.24936
10338005
1.93177
10338006
2.40654
10338007
3.1953
10338008
4.5474
10338009
8.10185
10338010
1.96523
10338011
6.3196
10338012
2.0986
10338013
1.7122
10338014
1.82205
10338015
1.73396
10338016
7.74461
10338017
13.1678
10338018
7.14867
10338019
5.93051
10338020
8.12456
Total number of rows:
35556
Table truncated, full table size
586 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM802290_1017.CEL.gz
4.1 Mb
(ftp)
(http)
CEL
GSM802290_1017.rma-gene-default.chp.gz
270.1 Kb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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