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| Status |
Public on Dec 31, 2006 |
| Title |
control day 2 (#22) vs. 400 mg/kg day 2 BECM (#59) |
| Sample type |
RNA |
| |
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| Channel 1 |
| Source name |
control day 2 (#22)
|
| Organism |
Rattus norvegicus |
| Characteristics |
Total cardiac RNA from control day 2 (#22)
|
| Extracted molecule |
total RNA |
| Extraction protocol |
QIAGEN Rneasy kit (QIAGEN, Valencia, CA)
|
| Label |
Cy3
|
| |
|
| Channel 2 |
| Source name |
400 mg/kg day 2 BECM (#59)
|
| Organism |
Rattus norvegicus |
| Characteristics |
Total cardiac RNA from 400 mg/kg day 2 BECM (#59)
|
| Extracted molecule |
total RNA |
| Extraction protocol |
QIAGEN Rneasy kit (QIAGEN, Valencia, CA)
|
| Label |
Cy5
|
| |
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| |
| Description |
control day 2 (#22) vs. 400 mg/kg day 2 BECM (#59)
|
| Data processing |
Loess normalized, and combined dye flip replicates with Rosetta Resolver error weighted model
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| |
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| Submission date |
Feb 16, 2006 |
| Last update date |
Feb 17, 2006 |
| Contact name |
Joel Parker |
| E-mail(s) |
[email protected]
|
| Organization name |
Constella Group
|
| Street address |
2605 Meridian Parkway
|
| City |
Durham |
| State/province |
NC |
| ZIP/Postal code |
27713 |
| Country |
USA |
| |
|
| Platform ID |
GPL890 |
| Series (1) |
| GSE4254 |
Bis(2-chloroethoxy)methane-induced heart toxicity and recovery in male fisher rats |
|
| Data table header descriptions |
| ID_REF |
probeset IDs from the Agilent Rat Oligo (4130A) array |
| VALUE |
log2 of PRE_VALUE |
| PRE_VALUE |
ratios: Loess normalized, and combined dye flip replicates with Rosetta Resolver |
| Data table |
| ID_REF |
VALUE |
PRE_VALUE |
| 3 |
-0.0996 |
0.93326 |
| 4 |
-0.0103 |
0.99289 |
| 5 |
-0.1079 |
0.92793 |
| 6 |
-0.1802 |
0.88257 |
| 8 |
0.0369 |
1.02593 |
| 9 |
0.0416 |
1.02922 |
| 10 |
0.0253 |
1.01766 |
| 11 |
0.1004 |
1.0721 |
| 12 |
0.0453 |
1.03191 |
| 13 |
0.1377 |
1.10016 |
| 15 |
0.1066 |
1.07668 |
| 16 |
0.1287 |
1.0933 |
| 17 |
0.4491 |
1.36521 |
| 18 |
-0.0743 |
0.94981 |
| 19 |
0.1435 |
1.10455 |
| 20 |
0.0948 |
1.0679 |
| 22 |
-0.1890 |
0.87724 |
| 23 |
0.0642 |
1.04552 |
| 24 |
-0.1886 |
0.87748 |
| 25 |
-0.1192 |
0.9207 |
Total number of rows: 20500
Table truncated, full table size 419 Kbytes.
| Supplementary data files not provided |
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