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Status
Public on Jan 02, 2004
Title
Agilent-011868 Rat Oligo Microarray G4130A (Feature Number version)
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Rattus norvegicus Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Catalog number
G4130A
Description
Submission date
Jan 02, 2004
Last update date
Dec 06, 2012
Organization
Agilent Technologies
E-mail(s)
[email protected] Phone
877-424-4536
URL
http://www.agilent.com Department
Street address
City
Palo Alto
State/province
CA
ZIP/Postal code
94304
Country
USA
Samples (1093)
GSM36415 , GSM36416 , GSM36417 , GSM36418 , GSM36419 , GSM36420
GSM36421 ,
GSM36422 ,
GSM45823 ,
GSM45824 ,
GSM45825 ,
GSM45826 ,
GSM45827 ,
GSM45828 ,
GSM45829 ,
GSM45830 ,
GSM45831 ,
GSM45832 ,
GSM45833 ,
GSM45834 ,
GSM45835 ,
GSM45836 ,
GSM45837 ,
GSM45838 ,
GSM45839 ,
GSM45840 ,
GSM45841 ,
GSM45842 ,
GSM52682 ,
GSM52683 ,
GSM52684 ,
GSM52685 ,
GSM61779 ,
GSM61796 ,
GSM61797 ,
GSM61798 ,
GSM61799 ,
GSM61800 ,
GSM61801 ,
GSM61802 ,
GSM61803 ,
GSM61804 ,
GSM61805 ,
GSM61806 ,
GSM96935 ,
GSM96936 ,
GSM96937 ,
GSM96938 ,
GSM96939 ,
GSM96940 ,
GSM96941 ,
GSM96942 ,
GSM96943 ,
GSM96944 ,
GSM96945 ,
GSM96946 ,
GSM97277 ,
GSM97278 ,
GSM97279 ,
GSM97280 ,
GSM97281 ,
GSM97282 ,
GSM97283 ,
GSM97284 ,
GSM97285 ,
GSM97286 ,
GSM97287 ,
GSM97288 ,
GSM97289 ,
GSM97290 ,
GSM97291 ,
GSM97292 ,
GSM97293 ,
GSM97294 ,
GSM97295 ,
GSM97296 ,
GSM97297 ,
GSM97298 ,
GSM97299 ,
GSM97300 ,
GSM97301 ,
GSM97302 ,
GSM97303 ,
GSM97304 ,
GSM97305 ,
GSM97306 ,
GSM97307 ,
GSM97308 ,
GSM97309 ,
GSM97310 ,
GSM97311 ,
GSM97312 ,
GSM97313 ,
GSM97314 ,
GSM98747 ,
GSM98755 ,
GSM98756 ,
GSM98757 ,
GSM105775 ,
GSM105776 ,
GSM105777 ,
GSM105778 ,
GSM105779 ,
GSM105780 ,
GSM105781 ,
GSM105782 ,
GSM105783 ,
GSM105784 ,
GSM105785 ,
GSM105786 ,
GSM105787 ,
GSM105788 ,
GSM105789 ,
GSM105790 ,
GSM115033 ,
GSM115034 ,
GSM115035 ,
GSM115036 ,
GSM115037 ,
GSM115038 ,
GSM115039 ,
GSM115040 ,
GSM115041 ,
GSM115042 ,
GSM115043 ,
GSM115044 ,
GSM120978 ,
GSM120979 ,
GSM120980 ,
GSM120981 ,
GSM120982 ,
GSM120983 ,
GSM120984 ,
GSM120985 ,
GSM120986 ,
GSM120987 ,
GSM120988 ,
GSM120989 ,
GSM120990 ,
GSM120991 ,
GSM120992 ,
GSM120993 ,
GSM120994 ,
GSM120995 ,
GSM120996 ,
GSM120997 ,
GSM120998 ,
GSM120999 ,
GSM121000 ,
GSM121001 ,
GSM121002 ,
GSM121003 ,
GSM121004 ,
GSM121005 ,
GSM121006 ,
GSM121007 ,
GSM121008 ,
GSM121009 ,
GSM121010 ,
GSM121011 ,
GSM121012 ,
GSM121013 ,
GSM121014 ,
GSM121015 ,
GSM121016 ,
GSM121017 ,
GSM121018 ,
GSM121019 ,
GSM121020 ,
GSM121021 ,
GSM121022 ,
GSM121023 ,
GSM121024 ,
GSM121025 ,
GSM121026 ,
GSM121027 ,
GSM121028 ,
GSM121029 ,
GSM121030 ,
GSM121031 ,
GSM121032 ,
GSM121033 ,
GSM121034 ,
GSM121035 ,
GSM121036 ,
GSM121037 ,
GSM121038 ,
GSM121039 ,
GSM121040 ,
GSM121041 ,
GSM121042 ,
GSM121043 ,
GSM121044 ,
GSM121045 ,
GSM121046 ,
GSM121047 ,
GSM121048 ,
GSM121049 ,
GSM121050 ,
GSM121051 ,
GSM121052 ,
GSM121053 ,
GSM121054 ,
GSM121055 ,
GSM121056 ,
GSM121057 ,
GSM121058 ,
GSM121059 ,
GSM121060 ,
GSM121061 ,
GSM121062 ,
GSM121063 ,
GSM121064 ,
GSM121065 ,
GSM121066 ,
GSM121067 ,
GSM121068 ,
GSM121069 ,
GSM121070 ,
GSM121071 ,
GSM121072 ,
GSM121073 ,
GSM121074 ,
GSM121075 ,
GSM121076 ,
GSM121077 ,
GSM121078 ,
GSM121079 ,
GSM121080 ,
GSM121081 ,
GSM121082 ,
GSM121083 ,
GSM121084 ,
GSM121085 ,
GSM121086 ,
GSM121087 ,
GSM121088 ,
GSM121089 ,
GSM121090 ,
GSM121091 ,
GSM121092 ,
GSM121093 ,
GSM121094 ,
GSM121095 ,
GSM121096 ,
GSM121097 ,
GSM121098 ,
GSM121099 ,
GSM121100 ,
GSM121101 ,
GSM121103 ,
GSM121104 ,
GSM121105 ,
GSM121106 ,
GSM121107 ,
GSM121108 ,
GSM121109 ,
GSM121110 ,
GSM121111 ,
GSM121112 ,
GSM121113 ,
GSM121114 ,
GSM121115 ,
GSM121116 ,
GSM121117 ,
GSM121118 ,
GSM121119 ,
GSM121120 ,
GSM121121 ,
GSM121122 ,
GSM121123 ,
GSM121124 ,
GSM121125 ,
GSM121126 ,
GSM121127 ,
GSM121128 ,
GSM121129 ,
GSM121130 ,
GSM121131 ,
GSM121132 ,
GSM121133 ,
GSM121134 ,
GSM121135 ,
GSM121136 ,
GSM121137 ,
GSM121138 ,
GSM121139 ,
GSM121140 ,
GSM121141 ,
GSM121142 ,
GSM121143 ,
GSM121144 ,
GSM121145 ,
GSM121146 ,
GSM121147 ,
GSM121148 ,
GSM121149 ,
GSM121150 ,
GSM121151 ,
GSM121152 ,
GSM121153 ,
GSM121154 ,
GSM121155 ,
GSM121156 ,
GSM121157 ,
GSM121158 ,
GSM121159 ,
GSM121160 ,
GSM121161 ,
GSM121162 ,
GSM121163 ,
GSM121164 ,
GSM121165 ,
GSM121166 ,
GSM121167 ,
GSM121168 ,
GSM121169 ,
GSM121170 ,
GSM121171 ,
GSM121172 ,
GSM121173 ,
GSM121174 ,
GSM121175 ,
GSM121176 ,
GSM121177 ,
GSM121178 ,
GSM121179 ,
GSM121180 ,
GSM121181 ,
GSM121182 ,
GSM121183 ,
GSM121184 ,
GSM121185 ,
GSM121186 ,
GSM121187 ,
GSM121188 ,
GSM121189 ,
GSM121190 ,
GSM121191 ,
GSM121192 ,
GSM121193 ,
GSM121194 ,
GSM121195 ,
GSM121196 ,
GSM121197 ,
GSM121198 ,
GSM121199 ,
GSM121200 ,
GSM121201 ,
GSM121202 ,
GSM122894 ,
GSM122895 ,
GSM122896 ,
GSM122897 ,
GSM122898 ,
GSM122899 ,
GSM122900 ,
GSM122960 ,
GSM122961 ,
GSM122962 ,
GSM122963 ,
GSM122964 ,
GSM122965 ,
GSM122966 ,
GSM122967 ,
GSM122968 ,
GSM122969 ,
GSM122970 ,
GSM122971 ,
GSM122972 ,
GSM122973 ,
GSM122974 ,
GSM122975 ,
GSM122976 ,
GSM122977 ,
GSM122978 ,
GSM122979 ,
GSM122980 ,
GSM122981 ,
GSM122982 ,
GSM122983 ,
GSM122984 ,
GSM122985 ,
GSM122986 ,
GSM122987 ,
GSM122988 ,
GSM122989 ,
GSM122990 ,
GSM122991 ,
GSM122992 ,
GSM122993 ,
GSM122995 ,
GSM122996 ,
GSM122997 ,
GSM122998 ,
GSM122999 ,
GSM123000 ,
GSM123001 ,
GSM124676 ,
GSM124677 ,
GSM124678 ,
GSM124679 ,
GSM124680 ,
GSM124681 ,
GSM124682 ,
GSM124683 ,
GSM124684 ,
GSM124685 ,
GSM124686 ,
GSM124687 ,
GSM124688 ,
GSM124689 ,
GSM124690 ,
GSM124691 ,
GSM124692 ,
GSM124693 ,
GSM124694 ,
GSM124695 ,
GSM124696 ,
GSM124697 ,
GSM124698 ,
GSM124699 ,
GSM124700 ,
GSM124701 ,
GSM124702 ,
GSM124703 ,
GSM124704 ,
GSM124705 ,
GSM124706 ,
GSM124707 ,
GSM124708 ,
GSM124709 ,
GSM124710 ,
GSM124711 ,
GSM124712 ,
GSM124713 ,
GSM124714 ,
GSM124715 ,
GSM124716 ,
GSM124717 ,
GSM124718 ,
GSM124719 ,
GSM124720 ,
GSM124721 ,
GSM124722 ,
GSM124723 ,
GSM124724 ,
GSM124725 ,
GSM124726 ,
GSM124727 ,
GSM124728 ,
GSM124729 ,
GSM124730 ,
GSM124731 ,
GSM124732 ,
GSM124733 ,
GSM124734 ,
GSM124735 ,
GSM124736 ,
GSM124737 ,
GSM124738 ,
GSM124739 ,
GSM124740 ,
GSM124741 ,
GSM124742 ,
GSM124743 ,
GSM124744 ,
GSM124745 ,
GSM124746 ,
GSM124747 ,
GSM129829 ,
GSM129830 ,
GSM129831 ,
GSM129832 ,
GSM129833 ,
GSM129834 ,
GSM129835 ,
GSM129836 ,
GSM129837 ,
GSM129838 ,
GSM129839 ,
GSM129840 ,
GSM129841 ,
GSM129842 ,
GSM129843 ,
GSM129844 ,
GSM129845 ,
GSM129846 ,
GSM129847 ,
GSM129848 ,
GSM129849 ,
GSM129850 ,
GSM129851 ,
GSM129852 ,
GSM129853 ,
GSM129854 ,
GSM129855 ,
GSM129856 ,
GSM129857 ,
GSM129858 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here Series (30)
GSE2015 Intestinal epithelial cells transfected with Ras and treated with TGF-beta-1
GSE2441 Hepatic Gene Expression Changes Throughout the Day in the Fischer Rat
GSE2726 parous and AMV mammary gland before and after MNU treatment
GSE2982 Effect of inhaled anesthetic to cultured cortical neurons
GSE4254 Bis(2-chloroethoxy)methane-induced heart toxicity and recovery in male fisher rats
GSE4270 Aging Induced Alterations in Hepatic Gene Expression of the Male Fisher Rat
GSE4327 Modulation of cardiomyocyte gene expression by n-3 PUFA supplementation
GSE4682 Gene expression analysis of peritoneal mesotheliomas following chemical treatment in F344 rats
GSE5104 Genome-wide expression profile in rat model of renal isografts from brain dead donors
GSE5337 Gene Expression Profiling In Rat Smooth Muscle Cells Modulated by Rapamycin and Paclitaxel.
GSE5381 Gene expression analysis of liver and kidney following methapyrilene treatment in male Sprague-Dawley rats
GSE5593 Acetaminophen (APAP) Rat Blood Training Gene Expression Data Set
GSE5594 Acetaminophen (APAP) Rat Blood Test Gene Expression Data Set
GSE5595 Acetaminophen (APAP) Rat Liver Test Gene Expression Data Set
GSE5652 Blood and liver exposed to acetaminophen (APAP)
GSE5860 Gene expression analysis of rat livers after exposure to acetaminophen
GSE7087 Global gene expression profiling on renal scarring in rat model of pyelonephritis
GSE7222 Global gene expression analysis of quercetin bioactivity in cultured rat cardiomyocytes
GSE7483 Microarray analysis of aortic tissue from different rat hypertensive models
GSE8201 Expression Profiling of Genes Concerning to Protective Effect in Heart by Benidipine Hydrochloride.
GSE8423 Gene Expression Analysis of the Rat Retina during Maturation
GSE10032 The acute effects of methoxyacetic acid exposure on testis gene expression
GSE11520 Identification of flap structure specific endonuclease 1 as a factor involved in LTM formation of aversive learning
GSE12018 Gene Expression Analysis of Carbonyl Sulfide Neurotoxicity
GSE13112 DNA topoisomerase IIbeta (topo IIbeta) regulates gene expression in developing cerebellar granule cells (CGC)
GSE13465 Acetaminophen-induced gene expression profiles in sandwich-cultured primary rat hepatoctyes
GSE16750 Aortic gene expression profile of rats exposed in utero to maternal diabetes
GSE24801 Cultured OEC versus cultured SC and versus native OEC
GSE34651 Mechanisms of Pancreatic Acinar Cell Neoplasia Associated with Gene Expression Changes caused by Dietary Exposure of Rats to Ammonium perfluorooctanoate, Wyeth 14,643 or Diethylhexyl phthalate
GSE55992 Gene expression of rat uterine endometrial stromal cells treated with ethanol (vehicle) or 0.1 nM progestin R5020
Relations Alternative to
GPL7267
Data table header descriptions ID Agilent feature number
COL Column
ROW Row
NAME Name
SPOT_ID Spot identifier
CONTROL_TYPE Control type
REFSEQ RefSeqAccession
GB_ACC GenBankAccession
GENE Entrez Gene ID
GENE_SYMBOL Gene Symbol
GENE_NAME Gene Name
UNIGENE_ID UnigeneID
ENSEMBL_ID EnsemblID
TIGR_ID TIGRID
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
CYTOBAND Cytoband
DESCRIPTION Description
GO_ID GoIDs
SEQUENCE
Data table ID COL ROW NAME SPOT_ID CONTROL_TYPE REFSEQ GB_ACC GENE GENE_SYMBOL GENE_NAME UNIGENE_ID ENSEMBL_ID TIGR_ID ACCESSION_STRING CHROMOSOMAL_LOCATION CYTOBAND DESCRIPTION GO_ID SEQUENCE 1
105
215
BrightCorner
BrightCorner
pos
2
105
214
NegativeControl
NegativeControl
neg
3
105
213
XM_233260
A_43_P21252
FALSE
XM_233260
XM_233260 313427 Usp24_predicted
ubiquitin specific protease 24 (predicted)
Rn.74199
ENSRNOT00000007778
ref|XM_233260|ref|XM_001064937|gb|CB546590
chr5:127474724-127474783
rn|5q34
PREDICTED: Rattus norvegicus ubiquitin specific protease 24 (predicted) (Usp24_predicted), mRNA [XM_233260]
TGTGTTGGTAATTCACCTGATGAGATTTGGCTTTGACTGGGAGAGTGGACGATCCATCAA
4
105
212
AW919304
A_42_P534203
FALSE
AW919304 Rn.24396
TC556152
gb|AW919304|tc|TC556152
chr19:52045902-52045961
rn|19q12
AW919304 EST350608 Rat gene index, normalized rat, norvegicus, Bento Soares Rattus norvegicus cDNA clone RGIFP51 5' end, mRNA sequence [AW919304]
TAAATCAGACTTCACACCTGAAGCAAGGGACGCTCAAATTTAAAATCCTCTGCTCCTTTA
5
105
211
CB547437
A_43_P22195
FALSE
CB547437 Rn.124702
gb|CB547437
CB547437 AMGNNUC:SRPG2-00026-B12-A srpg2 (10238) Rattus norvegicus cDNA clone srpg2-00026-b12 5', mRNA sequence [CB547437]
AGTCACTCACGAAGTCGATCTAGAAGTTCCACCTCATCTTACCGATCAAGAAGCTACTCT
6
105
210
TC554731
A_43_P16421
FALSE
TC554731
tc|TC554731
chr12:27892389-27892448
rn|12q13
SUM2_MOUSE (Q8BPG6) Sulfatase modifying factor 2 precursor (C-alpha-formyglycine-generating enzyme 2), partial (21%) [TC554731]
TATATATCCACTTCCTCAACTATCAATAACCTTTGGGCCCATACAGAGAAATAGGGCTGG
7
105
209
Pro25G
Pro25G
pos
8
105
208
NM_130424
A_43_P13118
FALSE
NM_130424 156435 Tmprss2
transmembrane protease, serine 2
Rn.81082
gb|NM_130424|gb|AB073550
chr11:37638033-37637974
rn|11q12
Rattus norvegicus transmembrane protease, serine 2 (Tmprss2), mRNA [NM_130424]
GO:0004252(serine-type endopeptidase activity)|GO:0006508(proteolysis)|GO:0016021(integral to membrane)
TCAGATGTGCTGAATGCTGCCATGGTACCCTTGATCGAGCCCTCCAAATGTAATAGTAAA
9
105
207
XM_223116
A_43_P19445
FALSE
XM_223116 Rn.154568
ENSRNOT00000004704
gb|XM_223116|gb|CB605581|ens|ENSRNOT00000004704|ens|ENSRNOT00000000046
chr13:70223579-70214510
rn|13q21
Rattus norvegicus similar to 6820428L09 protein (LOC305101), mRNA [XM_223116]
AGGACCTTTGTTCCCAAGCTGGAACCTGTGCTGAGCGCCAAGCATGAGGAAGCCAAGCAT
10
105
206
NM_001014175
A_43_P11302
FALSE
NM_001014175
NM_001014175 361990 LOC361990
similar to DKFZP547E1010 protein
Rn.15859
ENSRNOT00000017561
TC535427
ref|NM_001014175|ref|XM_001068792|ref|XM_575736|gb|BC100084
chr2:182722112-182722084
rn|2q34
Rattus norvegicus similar to DKFZP547E1010 protein (LOC361990), mRNA [NM_001014175]
ATGTCGAAAACTAAAGGACACCTGGATGCTTGAATTGGATGCCTACATGGCACAGACAGA
11
105
205
XM_342271
A_43_P22361
FALSE
XM_342271
XM_342271 361975 Lrba_predicted
LPS-responsive beige-like anchor (predicted)
ENSRNOT00000023418
TC548842
ref|XM_342271|ref|XM_001066755|ref|XM_001066811|ref|XM_001066905
chr2:178247079-178247138
rn|2q34
PREDICTED: Rattus norvegicus LPS-responsive beige-like anchor (predicted) (Lrba_predicted), mRNA [XM_342271]
GO:0007165(signal transduction)|GO:0008104(protein localization)|GO:0016023(cytoplasmic membrane-bound vesicle)|GO:0016197(endosome transport)|GO:0051018(protein kinase A binding)
TCGAAAAGTGAAGGGATCCGAGTACAGGCACTCAAGGCACTGGGCTACTTTTTAAAACAT
12
105
204
TC541420
A_43_P10152
FALSE
TC541420
tc|TC541420
chr9:56777989-56778049
rn|9q31
ACTTTGAGAAGCACAGCTCATGGGGCTCACGCCCTTCGCCACGGTCGGACAAAACCCGGA
13
105
203
NM_012650
A_42_P573643
FALSE
NM_012650
NM_012650 24775 Shbg
sex hormone binding globulin
Rn.37473
ENSRNOT00000015248
TC572903
ref|NM_012650|gb|M15034|gb|BC097336|ens|ENSRNOT00000015248
chr10:56446733-56446372
rn|10q24
Rattus norvegicus sex hormone binding globulin (Shbg), mRNA [NM_012650]
GO:0005496(steroid binding)|GO:0005497(androgen binding)|GO:0005515(protein binding)|GO:0005576(extracellular region)|GO:0005615(extracellular space)|GO:0008289(lipid binding)|GO:0009914(hormone transport)|GO:0042803(protein homodimerization activity)
ACCCTCAGGGCCATCTCTCCCTTGGGGCTTTACCAGGAGAGGACTCTTCTGCTTCCTTTT
14
105
202
Pro25G
Pro25G
pos
15
105
201
NM_139105
A_43_P13367
FALSE
NM_139105
NM_139105 245964 Rnh1
ribonuclease/angiogenin inhibitor 1
Rn.3756
ENSRNOT00000022241
TC571968
ref|NM_139105|gb|BC070501|ens|ENSRNOT00000022241|ens|ENSRNOT00000041526
chr1:201508732-201508674
rn|1q41
Rattus norvegicus ribonuclease/angiogenin inhibitor 1 (Rnh1), mRNA [NM_139105]
GO:0006401(RNA catabolism)|GO:0008428(ribonuclease inhibitor activity)
GCTTTGGTTGTCCTAGGGTTGGACTGGCGATAAGCATTGGGATCTTACTTCAGTAGAAAA
16
105
200
CB545584
A_43_P20241
FALSE
CB545584 Rn.41244
TC545112
gb|CB545584|tc|TC545112
chr1:263043037-263042985
rn|1q55
CB545584 AMGNNUC:HKR1-00265-A1-A Anemic Rat Kidney (10400) Rattus norvegicus cDNA clone hkr1-00265-a1 5', mRNA sequence [CB545584]
ACACCACATACTGGAGCCCAGAATATACCTTCCCGTCTCAGGAGGAGGCTATCCAGTGTG
17
105
199
XM_233713
A_43_P21201
FALSE
XM_233713 Rn.140941
ENSRNOT00000023614
gb|XM_233713|gb|CB544431|ens|ENSRNOT00000023614
chr5:172507446-172507387
rn|5q36
Rattus norvegicus similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma) (LOC313767), mRNA [XM_233713]
CACGCAGTGCTACATGCACAACAAACATGACCTTACCCATGCCTTTGAGCGCTATGAGAC
18
105
198
A_43_P11033
A_43_P11033
FALSE
chr1:085804665-085804724
rn|1q21
AGCGACAGCAAGATGTGATTCCGAGCGTGAAATTTCTTTTCATCTTCAGTCTGTGGACGT
19
105
197
CB545791
A_43_P13501
FALSE
CB545791 gb|CB545791
chr7:117211519-117211578
rn|7q34
CB545791 AMGNNUC:NRDG1-00053-D7-A nrdg1 (10855) Rattus norvegicus cDNA clone nrdg1-00053-d7 5', mRNA sequence [CB545791]
ACTCAGCTTGCTCTGTCTTTGGTTGGAAGACTTTGGGGGAAGTTCTTTTCCACTTCTGCC
20
105
196
A_43_P22765
A_43_P22765
FALSE
chr10:011888316-011888375
rn|10q12
GCCAAGAACTAGGAAAGGACGCAGTGGCCAGGACACACTAAAATAATGTCATGCTACCGG
22575 9188 Kbytes .Supplementary file Size Download File type/resource GPL890_old_annotations.txt.gz
2.8 Mb
(ftp) (http) TXT
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