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| Status |
Public on Dec 31, 2006 |
| Title |
control day 5 (#9) vs. 400 mg/kg day 5 BECM (#49) |
| Sample type |
RNA |
| |
|
| Channel 1 |
| Source name |
control day 5 (#9)
|
| Organism |
Rattus norvegicus |
| Characteristics |
Total cardiac RNA from control day 5 (#9)
|
| Extracted molecule |
total RNA |
| Extraction protocol |
QIAGEN Rneasy kit (QIAGEN, Valencia, CA)
|
| Label |
Cy3
|
| |
|
| Channel 2 |
| Source name |
400 mg/kg day 5 BECM (#49)
|
| Organism |
Rattus norvegicus |
| Characteristics |
Total cardiac RNA from 400 mg/kg day 5 BECM (#49)
|
| Extracted molecule |
total RNA |
| Extraction protocol |
QIAGEN Rneasy kit (QIAGEN, Valencia, CA)
|
| Label |
Cy5
|
| |
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| |
| Description |
control day 5 (#9) vs. 400 mg/kg day 5 BECM (#49)
|
| Data processing |
Loess normalized, and combined dye flip replicates with Rosetta Resolver error weighted model
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| |
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| Submission date |
Feb 16, 2006 |
| Last update date |
Feb 17, 2006 |
| Contact name |
Joel Parker |
| E-mail(s) |
[email protected]
|
| Organization name |
Constella Group
|
| Street address |
2605 Meridian Parkway
|
| City |
Durham |
| State/province |
NC |
| ZIP/Postal code |
27713 |
| Country |
USA |
| |
|
| Platform ID |
GPL890 |
| Series (1) |
| GSE4254 |
Bis(2-chloroethoxy)methane-induced heart toxicity and recovery in male fisher rats |
|
| Data table header descriptions |
| ID_REF |
probeset IDs from the Agilent Rat Oligo (4130A) array |
| VALUE |
log2 of PRE_VALUE |
| PRE_VALUE |
ratios: Loess normalized, and combined dye flip replicates with Rosetta Resolver |
| Data table |
| ID_REF |
VALUE |
PRE_VALUE |
| 3 |
0.0158 |
1.01102 |
| 4 |
-0.0811 |
0.94536 |
| 5 |
-0.1387 |
0.90835 |
| 6 |
-0.0766 |
0.94826 |
| 8 |
-0.0146 |
0.98993 |
| 9 |
0.0842 |
1.06008 |
| 10 |
-0.0394 |
0.97308 |
| 11 |
0.0152 |
1.01059 |
| 12 |
0.0093 |
1.00647 |
| 13 |
-0.0196 |
0.98654 |
| 15 |
-0.1047 |
0.93003 |
| 16 |
-0.0566 |
0.96152 |
| 17 |
0.0280 |
1.01959 |
| 18 |
0.0072 |
1.00501 |
| 19 |
-0.0416 |
0.97157 |
| 20 |
0.4935 |
1.40781 |
| 22 |
0.0484 |
1.03413 |
| 23 |
0.0328 |
1.02298 |
| 24 |
0.0022 |
1.00153 |
| 25 |
0.0337 |
1.02363 |
Total number of rows: 20500
Table truncated, full table size 418 Kbytes.
| Supplementary data files not provided |
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