NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM9704 Query DataSets for GSM9704
Status Public on Aug 06, 2004
Title nl022
Sample type RNA
 
Source name primary acute lymphoblastic leukemia cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:84, Count:32
Corner- Avg:5496, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:22.382311,SFGene:All
Background:Avg:49.39,Stdev:0.61,Max:50.9,Min:47.7
Noise:Avg:1.91,Stdev:0.04,Max:2.1,Min:1.8
RawQ:2.20
Keywords = ALL
Lot batch =
 
Submission date Sep 05, 2003
Last update date May 28, 2005
Contact name William E Evans
E-mail(s) [email protected]
Phone 901-495-4995
Fax 901-495-6869
URL http://www.stjude.org/leukemia/bio_evans.htm
Organization name St.Jude Children's Research Hospital
Department Pharmaceutical Sciences
Lab Evans
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL96
Series (10)
GSE635 Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE643 ASP sensitive all ALL
GSE646 PRED sensitive all ALL

Data table header descriptions
ID_REF As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF VALUE DETECTION P-VALUE
1007_s_at 866.3 0.013092
1053_at 438.3 0.007543
117_at 77.7 0.175989
121_at 1890.7 0.003067
1255_g_at 171.0 0.081337
1294_at 675.2 0.017001
1316_at 158.4 0.250724
1320_at 31.1 0.849473
1405_i_at 50.1 0.703191
1431_at 117.7 0.250724
1438_at 244.1 0.397994
1487_at 382.0 0.234557
1494_f_at 413.6 0.066865
1598_g_at 780.7 0.138765
160020_at 892.7 0.035163
1729_at 505.7 0.150527
1773_at 661.8 0.039365
177_at 325.5 0.339558
179_at 585.5 0.150527
1861_at 422.5 0.035163

Total number of rows: 22283

Table truncated, full table size 561 Kbytes.




Supplementary file Size Download File type/resource
GSM9704.CEL.gz 3.3 Mb (ftp)(http) CEL

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap