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Sample GSM9716

Query DataSets for GSM9716

Status

Public on Aug 06, 2004

Title

nl032

Sample type

RNA

Source name

primary acute lymphoblastic leukemia cells

Organism

Homo sapiens

Extracted molecule

total RNA

Description

Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:48, Count:32
Corner- Avg:4796, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:31.842726,SFGene:All
Background:Avg:38.93,Stdev:0.90,Max:41.0,Min:36.7
Noise:Avg:1.36,Stdev:0.06,Max:1.5,Min:1.2
RawQ:1.77
Keywords = ALL
Lot batch =

Submission date

Sep 05, 2003

Last update date

May 28, 2005

Contact name

William E Evans

E-mail(s)

[email protected]

Phone

901-495-4995

Fax

901-495-6869

URL

http://www.stjude.org/leukemia/bio_evans.htm

Organization name

St.Jude Children's Research Hospital

Department

Pharmaceutical Sciences

Lab

Evans

Street address

332 N. Lauderdale St.

City

Memphis

State/province

ZIP/Postal code

38105

Country

USA

Platform ID

GPL96

Series (10)

More...

GSE635	Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE645	ASP resistant all ALL
GSE646	PRED sensitive all ALL

Data table header descriptions
ID_REF	As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE	This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE	Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF	VALUE	DETECTION P-VALUE
1007_s_at	839.1	0.014937
1053_at	525.9	0.011447
117_at	143.9	0.520620
121_at	1856.5	0.001141
1255_g_at	142.9	0.204022
1294_at	454.5	0.127645
1316_at	466.6	0.003067
1320_at	56.2	0.621816
1405_i_at	40.2	0.818657
1431_at	158.5	0.043968
1438_at	185.9	0.520620
1487_at	409.3	0.250724
1494_f_at	329.9	0.073830
1598_g_at	1008.5	0.204022
160020_at	1187.3	0.035163
1729_at	55.0	0.910595
1773_at	534.1	0.098054
177_at	239.4	0.138765
179_at	2182.3	0.039365
1861_at	325.5	0.098054

Total number of rows: 22283

Table truncated, full table size 561 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM9716.CEL.gz	3.0 Mb	(ftp)(http)	CEL