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Sample GSM9726

Query DataSets for GSM9726

Status

Public on Aug 06, 2004

Title

nl042

Sample type

RNA

Source name

primary acute lymphoblastic leukemia cells

Organism

Homo sapiens

Extracted molecule

total RNA

Description

Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:37, Count:32
Corner- Avg:4275, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:37.794636,SFGene:All
Background:Avg:38.36,Stdev:0.72,Max:39.8,Min:36.3
Noise:Avg:1.30,Stdev:0.04,Max:1.4,Min:1.1
RawQ:1.72
Keywords = ALL
Lot batch =

Submission date

Sep 05, 2003

Last update date

May 28, 2005

Contact name

William E Evans

E-mail(s)

[email protected]

Phone

901-495-4995

Fax

901-495-6869

URL

http://www.stjude.org/leukemia/bio_evans.htm

Organization name

St.Jude Children's Research Hospital

Department

Pharmaceutical Sciences

Lab

Evans

Street address

332 N. Lauderdale St.

City

Memphis

State/province

ZIP/Postal code

38105

Country

USA

Platform ID

GPL96

Series (10)

More...

GSE635	Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE643	ASP sensitive all ALL
GSE646	PRED sensitive all ALL

Data table header descriptions
ID_REF	As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE	This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE	Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF	VALUE	DETECTION P-VALUE
1007_s_at	1590.6	0.004863
1053_at	397.8	0.013092
117_at	109.5	0.541184
121_at	1541.7	0.005643
1255_g_at	121.4	0.561639
1294_at	911.2	0.006532
1316_at	167.8	0.035163
1320_at	41.4	0.715253
1405_i_at	68.9	0.681117
1431_at	181.1	0.162935
1438_at	210.6	0.500000
1487_at	509.2	0.218983
1494_f_at	342.2	0.218983
1598_g_at	965.4	0.162935
160020_at	852.4	0.081337
1729_at	215.8	0.320830
1773_at	403.9	0.127645
177_at	107.3	0.339558
179_at	1199.0	0.150527
1861_at	308.2	0.117160

Total number of rows: 22283

Table truncated, full table size 561 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM9726.CEL.gz	3.0 Mb	(ftp)(http)	CEL