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Sample GSM9737

Query DataSets for GSM9737

Status

Public on Aug 06, 2004

Title

nl053

Sample type

RNA

Source name

primary acute lymphoblastic leukemia cells

Organism

Homo sapiens

Extracted molecule

total RNA

Description

Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:50, Count:32
Corner- Avg:2646, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:58.337646,SFGene:All
Background:Avg:37.26,Stdev:0.64,Max:38.8,Min:35.6
Noise:Avg:1.14,Stdev:0.04,Max:1.2,Min:1.0
RawQ:1.67
Keywords = ALL
Lot batch =

Submission date

Sep 05, 2003

Last update date

May 28, 2005

Contact name

William E Evans

E-mail(s)

[email protected]

Phone

901-495-4995

Fax

901-495-6869

URL

http://www.stjude.org/leukemia/bio_evans.htm

Organization name

St.Jude Children's Research Hospital

Department

Pharmaceutical Sciences

Lab

Evans

Street address

332 N. Lauderdale St.

City

Memphis

State/province

ZIP/Postal code

38105

Country

USA

Platform ID

GPL96

Series (8)

More...

GSE635	Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE643	ASP sensitive all ALL
GSE648	VCR sensitive all ALL

Data table header descriptions
ID_REF	As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE	This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE	Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF	VALUE	DETECTION P-VALUE
1007_s_at	1158.1	0.073830
1053_at	184.3	0.358690
117_at	195.2	0.378165
121_at	1412.0	0.002617
1255_g_at	31.9	0.882840
1294_at	775.4	0.002617
1316_at	223.0	0.175989
1320_at	231.0	0.732537
1405_i_at	271.7	0.413046
1431_at	309.9	0.027860
1438_at	222.2	0.520620
1487_at	206.4	0.641310
1494_f_at	642.1	0.005643
1598_g_at	977.2	0.107301
160020_at	527.1	0.048995
1729_at	123.8	0.479380
1773_at	56.3	0.697453
177_at	211.1	0.127645
179_at	1773.2	0.019304
1861_at	92.1	0.732537

Total number of rows: 22283

Table truncated, full table size 561 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM9737.CEL.gz	2.9 Mb	(ftp)(http)	CEL