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Sample GSM9743

Query DataSets for GSM9743

Status

Public on Aug 06, 2004

Title

nl059

Sample type

RNA

Source name

primary acute lymphoblastic leukemia cells

Organism

Homo sapiens

Extracted molecule

total RNA

Description

Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:143, Count:32
Corner- Avg:6052, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:30.286009,SFGene:All
Background:Avg:45.47,Stdev:0.74,Max:46.7,Min:43.4
Noise:Avg:1.50,Stdev:0.04,Max:1.7,Min:1.4
RawQ:1.96
Keywords = ALL
Lot batch =

Submission date

Sep 05, 2003

Last update date

May 28, 2005

Contact name

William E Evans

E-mail(s)

[email protected]

Phone

901-495-4995

Fax

901-495-6869

URL

http://www.stjude.org/leukemia/bio_evans.htm

Organization name

St.Jude Children's Research Hospital

Department

Pharmaceutical Sciences

Lab

Evans

Street address

332 N. Lauderdale St.

City

Memphis

State/province

ZIP/Postal code

38105

Country

USA

Platform ID

GPL96

Series (10)

More...

GSE635	Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE643	ASP sensitive all ALL
GSE646	PRED sensitive all ALL

Data table header descriptions
ID_REF	As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE	This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE	Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF	VALUE	DETECTION P-VALUE
1007_s_at	1005.2	0.002617
1053_at	143.9	0.397994
117_at	303.6	0.031336
121_at	1424.7	0.005643
1255_g_at	24.5	0.621816
1294_at	1120.4	0.001354
1316_at	313.6	0.117160
1320_at	160.5	0.500000
1405_i_at	82.4	0.801637
1431_at	164.6	0.043968
1438_at	162.3	0.218983
1487_at	647.3	0.250724
1494_f_at	278.3	0.117160
1598_g_at	728.0	0.218983
160020_at	696.7	0.014937
1729_at	48.3	0.765443
1773_at	156.9	0.218983
177_at	101.0	0.660442
179_at	894.7	0.175989
1861_at	468.9	0.006532

Total number of rows: 22283

Table truncated, full table size 560 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM9743.CEL.gz	3.1 Mb	(ftp)(http)	CEL