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Sample GSM9747

Query DataSets for GSM9747

Status

Public on Aug 06, 2004

Title

nl063

Sample type

RNA

Source name

primary acute lymphoblastic leukemia cells

Organism

Homo sapiens

Extracted molecule

total RNA

Description

Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:81, Count:32
Corner- Avg:5756, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:32.267799,SFGene:All
Background:Avg:41.99,Stdev:0.51,Max:43.1,Min:40.2
Noise:Avg:1.39,Stdev:0.04,Max:1.5,Min:1.3
RawQ:1.88
Keywords = ALL
Lot batch =

Submission date

Sep 05, 2003

Last update date

May 28, 2005

Contact name

William E Evans

E-mail(s)

[email protected]

Phone

901-495-4995

Fax

901-495-6869

URL

http://www.stjude.org/leukemia/bio_evans.htm

Organization name

St.Jude Children's Research Hospital

Department

Pharmaceutical Sciences

Lab

Evans

Street address

332 N. Lauderdale St.

City

Memphis

State/province

ZIP/Postal code

38105

Country

USA

Platform ID

GPL96

Series (6)

More...

GSE635	Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE648	VCR sensitive all ALL
GSE650	DNR sensitive all ALL

Data table header descriptions
ID_REF	As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE	This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE	Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF	VALUE	DETECTION P-VALUE
1007_s_at	690.6	0.019304
1053_at	254.6	0.162935
117_at	26.5	0.732537
121_at	1460.5	0.001141
1255_g_at	121.9	0.397994
1294_at	1465.9	0.000219
1316_at	376.3	0.107301
1320_at	38.7	0.765443
1405_i_at	104.8	0.235169
1431_at	169.1	0.117160
1438_at	37.7	0.781017
1487_at	378.0	0.175989
1494_f_at	353.2	0.060419
1598_g_at	773.6	0.127645
160020_at	504.2	0.014937
1729_at	113.2	0.621816
1773_at	251.6	0.218983
177_at	170.3	0.060419
179_at	1203.7	0.127645
1861_at	406.2	0.004180

Total number of rows: 22283

Table truncated, full table size 560 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM9747.CEL.gz	3.0 Mb	(ftp)(http)	CEL