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Sample GSM9748

Query DataSets for GSM9748

Status

Public on Aug 06, 2004

Title

nl064

Sample type

RNA

Source name

primary acute lymphoblastic leukemia cells

Organism

Homo sapiens

Extracted molecule

total RNA

Description

Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:41, Count:32
Corner- Avg:4311, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:39.217590,SFGene:All
Background:Avg:37.85,Stdev:0.60,Max:39.0,Min:36.4
Noise:Avg:1.32,Stdev:0.06,Max:1.6,Min:1.2
RawQ:1.77
Keywords = ALL
Lot batch =

Submission date

Sep 05, 2003

Last update date

May 28, 2005

Contact name

William E Evans

E-mail(s)

[email protected]

Phone

901-495-4995

Fax

901-495-6869

URL

http://www.stjude.org/leukemia/bio_evans.htm

Organization name

St.Jude Children's Research Hospital

Department

Pharmaceutical Sciences

Lab

Evans

Street address

332 N. Lauderdale St.

City

Memphis

State/province

ZIP/Postal code

38105

Country

USA

Platform ID

GPL96

Series (6)

More...

GSE635	Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE648	VCR sensitive all ALL
GSE650	DNR sensitive all ALL

Data table header descriptions
ID_REF	As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE	This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE	Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF	VALUE	DETECTION P-VALUE
1007_s_at	744.9	0.009985
1053_at	141.1	0.602006
117_at	220.3	0.204022
121_at	1413.6	0.002228
1255_g_at	82.0	0.541184
1294_at	665.8	0.007543
1316_at	364.7	0.073830
1320_at	19.4	0.960635
1405_i_at	27.8	0.877253
1431_at	145.5	0.127645
1438_at	50.1	0.479380
1487_at	545.7	0.162935
1494_f_at	377.3	0.073830
1598_g_at	682.2	0.162935
160020_at	649.4	0.054470
1729_at	67.4	0.697453
1773_at	425.6	0.066865
177_at	31.7	0.901946
179_at	1052.2	0.150527
1861_at	520.7	0.039365

Total number of rows: 22283

Table truncated, full table size 560 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM9748.CEL.gz	2.9 Mb	(ftp)(http)	CEL