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Sample GSM9749

Query DataSets for GSM9749

Status

Public on Aug 06, 2004

Title

nl065

Sample type

RNA

Source name

primary acute lymphoblastic leukemia cells

Organism

Homo sapiens

Extracted molecule

total RNA

Description

Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:87, Count:32
Corner- Avg:9181, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:19.830868,SFGene:All
Background:Avg:48.38,Stdev:1.53,Max:51.9,Min:44.2
Noise:Avg:1.82,Stdev:0.09,Max:2.1,Min:1.6
RawQ:2.13
Keywords = ALL
Lot batch =

Submission date

Sep 05, 2003

Last update date

May 28, 2005

Contact name

William E Evans

E-mail(s)

[email protected]

Phone

901-495-4995

Fax

901-495-6869

URL

http://www.stjude.org/leukemia/bio_evans.htm

Organization name

St.Jude Children's Research Hospital

Department

Pharmaceutical Sciences

Lab

Evans

Street address

332 N. Lauderdale St.

City

Memphis

State/province

ZIP/Postal code

38105

Country

USA

Platform ID

GPL96

Series (8)

More...

GSE635	Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE643	ASP sensitive all ALL
GSE648	VCR sensitive all ALL

Data table header descriptions
ID_REF	As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE	This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE	Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF	VALUE	DETECTION P-VALUE
1007_s_at	485.7	0.011447
1053_at	257.2	0.127645
117_at	75.3	0.438361
121_at	1135.2	0.008689
1255_g_at	123.5	0.397994
1294_at	450.1	0.048995
1316_at	246.5	0.066865
1320_at	75.6	0.641310
1405_i_at	31.5	0.877253
1431_at	24.7	0.438361
1438_at	192.5	0.204022
1487_at	275.8	0.218983
1494_f_at	233.1	0.054470
1598_g_at	764.4	0.175989
160020_at	814.7	0.031336
1729_at	33.9	0.561639
1773_at	311.5	0.138765
177_at	203.2	0.039365
179_at	1010.5	0.117160
1861_at	249.2	0.043968

Total number of rows: 22283

Table truncated, full table size 560 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM9749.CEL.gz	3.1 Mb	(ftp)(http)	CEL