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Sample GSM9753

Query DataSets for GSM9753

Status

Public on Aug 06, 2004

Title

nl069

Sample type

RNA

Source name

primary acute lymphoblastic leukemia cells

Organism

Homo sapiens

Extracted molecule

total RNA

Description

Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:43, Count:32
Corner- Avg:5078, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:49.126392,SFGene:All
Background:Avg:38.12,Stdev:0.96,Max:40.1,Min:35.6
Noise:Avg:1.26,Stdev:0.04,Max:1.4,Min:1.1
RawQ:1.76
Keywords = ALL
Lot batch =

Submission date

Sep 05, 2003

Last update date

May 28, 2005

Contact name

William E Evans

E-mail(s)

[email protected]

Phone

901-495-4995

Fax

901-495-6869

URL

http://www.stjude.org/leukemia/bio_evans.htm

Organization name

St.Jude Children's Research Hospital

Department

Pharmaceutical Sciences

Lab

Evans

Street address

332 N. Lauderdale St.

City

Memphis

State/province

ZIP/Postal code

38105

Country

USA

Platform ID

GPL96

Series (8)

More...

GSE635	Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE643	ASP sensitive all ALL
GSE649	VCR resistant all ALL

Data table header descriptions
ID_REF	As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE	This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE	Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF	VALUE	DETECTION P-VALUE
1007_s_at	442.1	0.162935
1053_at	179.3	0.581931
117_at	230.1	0.234519
121_at	1722.5	0.002228
1255_g_at	206.1	0.189687
1294_at	506.6	0.021866
1316_at	314.6	0.162935
1320_at	59.2	0.641310
1405_i_at	33.9	0.889551
1431_at	135.2	0.267463
1438_at	442.3	0.250724
1487_at	607.6	0.081337
1494_f_at	188.9	0.234557
1598_g_at	820.5	0.175989
160020_at	1073.3	0.039365
1729_at	85.9	0.458816
1773_at	273.5	0.127645
177_at	206.8	0.358690
179_at	1237.1	0.054470
1861_at	339.7	0.027860

Total number of rows: 22283

Table truncated, full table size 561 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM9753.CEL.gz	2.9 Mb	(ftp)(http)	CEL