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Sample GSM9767

Query DataSets for GSM9767

Status

Public on Aug 06, 2004

Title

nl083

Sample type

RNA

Source name

primary acute lymphoblastic leukemia cells

Organism

Homo sapiens

Extracted molecule

total RNA

Description

Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:65, Count:32
Corner- Avg:4610, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:37.187893,SFGene:All
Background:Avg:39.30,Stdev:1.01,Max:41.0,Min:36.5
Noise:Avg:1.25,Stdev:0.04,Max:1.4,Min:1.1
RawQ:1.78
Keywords = ALL
Lot batch =

Submission date

Sep 06, 2003

Last update date

May 28, 2005

Contact name

William E Evans

E-mail(s)

[email protected]

Phone

901-495-4995

Fax

901-495-6869

URL

http://www.stjude.org/leukemia/bio_evans.htm

Organization name

St.Jude Children's Research Hospital

Department

Pharmaceutical Sciences

Lab

Evans

Street address

332 N. Lauderdale St.

City

Memphis

State/province

ZIP/Postal code

38105

Country

USA

Platform ID

GPL96

Series (4)

More...

GSE635	Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE643	ASP sensitive all ALL
GSE653	ASP sensitive B-ALL

Data table header descriptions
ID_REF	As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE	This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE	Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF	VALUE	DETECTION P-VALUE
1007_s_at	1101.8	0.011447
1053_at	489.5	0.043968
117_at	52.6	0.520620
121_at	1597.5	0.004863
1255_g_at	149.2	0.204022
1294_at	830.2	0.000673
1316_at	141.7	0.043968
1320_at	25.1	0.872355
1405_i_at	89.1	0.388782
1431_at	250.4	0.117160
1438_at	221.2	0.302547
1487_at	245.2	0.500000
1494_f_at	282.8	0.054470
1598_g_at	656.3	0.162935
160020_at	708.1	0.039365
1729_at	346.8	0.250724
1773_at	196.2	0.162935
177_at	40.9	0.641310
179_at	1504.6	0.175989
1861_at	112.1	0.602006

Total number of rows: 22283

Table truncated, full table size 561 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM9767.CEL.gz	3.0 Mb	(ftp)(http)	CEL