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Sample GSM9771

Query DataSets for GSM9771

Status

Public on Aug 06, 2004

Title

nl087

Sample type

RNA

Source name

primary acute lymphoblastic leukemia cells

Organism

Homo sapiens

Extracted molecule

total RNA

Description

Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:36, Count:32
Corner- Avg:4078, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:53.985153,SFGene:All
Background:Avg:37.68,Stdev:0.80,Max:39.4,Min:35.8
Noise:Avg:1.22,Stdev:0.03,Max:1.3,Min:1.1
RawQ:1.75
Keywords = ALL
Lot batch =

Submission date

Sep 06, 2003

Last update date

May 28, 2005

Contact name

William E Evans

E-mail(s)

[email protected]

Phone

901-495-4995

Fax

901-495-6869

URL

http://www.stjude.org/leukemia/bio_evans.htm

Organization name

St.Jude Children's Research Hospital

Department

Pharmaceutical Sciences

Lab

Evans

Street address

332 N. Lauderdale St.

City

Memphis

State/province

ZIP/Postal code

38105

Country

USA

Platform ID

GPL96

Series (10)

More...

GSE635	Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE643	ASP sensitive all ALL
GSE646	PRED sensitive all ALL

Data table header descriptions
ID_REF	As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE	This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE	Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF	VALUE	DETECTION P-VALUE
1007_s_at	684.7	0.027860
1053_at	332.2	0.107301
117_at	320.7	0.175989
121_at	727.5	0.035163
1255_g_at	30.8	0.641310
1294_at	827.9	0.011447
1316_at	403.3	0.031336
1320_at	72.4	0.641310
1405_i_at	231.1	0.122747
1431_at	283.2	0.081337
1438_at	78.9	0.602006
1487_at	614.9	0.234557
1494_f_at	199.8	0.302547
1598_g_at	698.4	0.204022
160020_at	575.2	0.081337
1729_at	117.7	0.679170
1773_at	165.7	0.250724
177_at	30.8	0.926170
179_at	826.4	0.162935
1861_at	208.9	0.438361

Total number of rows: 22283

Table truncated, full table size 560 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM9771.CEL.gz	2.9 Mb	(ftp)(http)	CEL