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Sample GSM9779

Query DataSets for GSM9779

Status

Public on Aug 06, 2004

Title

nl095

Sample type

RNA

Source name

primary acute lymphoblastic leukemia cells

Organism

Homo sapiens

Extracted molecule

total RNA

Description

Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:80, Count:32
Corner- Avg:4700, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:49.160397,SFGene:All
Background:Avg:40.13,Stdev:0.86,Max:41.8,Min:38.2
Noise:Avg:1.29,Stdev:0.05,Max:1.4,Min:1.1
RawQ:1.83
Keywords = ALL
Lot batch =

Submission date

Sep 06, 2003

Last update date

May 28, 2005

Contact name

William E Evans

E-mail(s)

[email protected]

Phone

901-495-4995

Fax

901-495-6869

URL

http://www.stjude.org/leukemia/bio_evans.htm

Organization name

St.Jude Children's Research Hospital

Department

Pharmaceutical Sciences

Lab

Evans

Street address

332 N. Lauderdale St.

City

Memphis

State/province

ZIP/Postal code

38105

Country

USA

Platform ID

GPL96

Series (10)

More...

GSE635	Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE645	ASP resistant all ALL
GSE647	PRED resistant all ALL

Data table header descriptions
ID_REF	As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE	This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE	Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF	VALUE	DETECTION P-VALUE
1007_s_at	93.9	0.660442
1053_at	222.7	0.250724
117_at	120.7	0.397994
121_at	1650.7	0.013092
1255_g_at	174.6	0.339558
1294_at	816.7	0.027860
1316_at	339.2	0.024711
1320_at	453.9	0.320802
1405_i_at	125.9	0.877253
1431_at	124.6	0.098054
1438_at	239.1	0.458816
1487_at	527.8	0.234557
1494_f_at	444.7	0.073830
1598_g_at	579.8	0.339558
160020_at	1431.1	0.048995
1729_at	57.1	0.837065
1773_at	180.2	0.679170
177_at	339.5	0.066865
179_at	1289.0	0.117160
1861_at	128.6	0.602006

Total number of rows: 22283

Table truncated, full table size 561 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM9779.CEL.gz	2.9 Mb	(ftp)(http)	CEL