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Sample GSM9781

Query DataSets for GSM9781

Status

Public on Aug 06, 2004

Title

nl097

Sample type

RNA

Source name

primary acute lymphoblastic leukemia cells

Organism

Homo sapiens

Extracted molecule

total RNA

Description

Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:53, Count:32
Corner- Avg:6775, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:34.145565,SFGene:All
Background:Avg:43.39,Stdev:1.00,Max:46.4,Min:41.0
Noise:Avg:1.54,Stdev:0.06,Max:1.7,Min:1.4
RawQ:1.94
Keywords = ALL
Lot batch =

Submission date

Sep 06, 2003

Last update date

May 28, 2005

Contact name

William E Evans

E-mail(s)

[email protected]

Phone

901-495-4995

Fax

901-495-6869

URL

http://www.stjude.org/leukemia/bio_evans.htm

Organization name

St.Jude Children's Research Hospital

Department

Pharmaceutical Sciences

Lab

Evans

Street address

332 N. Lauderdale St.

City

Memphis

State/province

ZIP/Postal code

38105

Country

USA

Platform ID

GPL96

Series (8)

More...

GSE635	Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE645	ASP resistant all ALL
GSE646	PRED sensitive all ALL

Data table header descriptions
ID_REF	As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE	This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE	Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF	VALUE	DETECTION P-VALUE
1007_s_at	1634.5	0.004180
1053_at	365.1	0.234557
117_at	248.4	0.234557
121_at	1703.3	0.003067
1255_g_at	182.3	0.107301
1294_at	1410.4	0.000388
1316_at	421.2	0.021866
1320_at	167.6	0.267463
1405_i_at	23.7	0.911496
1431_at	202.2	0.284747
1438_at	227.5	0.561639
1487_at	369.0	0.339558
1494_f_at	415.4	0.066865
1598_g_at	646.8	0.048995
160020_at	879.1	0.035163
1729_at	265.0	0.438361
1773_at	312.5	0.048995
177_at	53.8	0.765443
179_at	1070.6	0.073830
1861_at	325.6	0.073830

Total number of rows: 22283

Table truncated, full table size 561 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM9781.CEL.gz	3.0 Mb	(ftp)(http)	CEL