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Sample GSM9786

Query DataSets for GSM9786

Status

Public on Aug 06, 2004

Title

nl102

Sample type

RNA

Source name

primary acute lymphoblastic leukemia cells

Organism

Homo sapiens

Extracted molecule

total RNA

Description

Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:76, Count:32
Corner- Avg:6861, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:39.357365,SFGene:All
Background:Avg:36.42,Stdev:0.58,Max:38.1,Min:35.3
Noise:Avg:1.33,Stdev:0.04,Max:1.5,Min:1.2
RawQ:1.75
Keywords = ALL
Lot batch =

Submission date

Sep 06, 2003

Last update date

May 28, 2005

Contact name

William E Evans

E-mail(s)

[email protected]

Phone

901-495-4995

Fax

901-495-6869

URL

http://www.stjude.org/leukemia/bio_evans.htm

Organization name

St.Jude Children's Research Hospital

Department

Pharmaceutical Sciences

Lab

Evans

Street address

332 N. Lauderdale St.

City

Memphis

State/province

ZIP/Postal code

38105

Country

USA

Platform ID

GPL96

Series (6)

More...

GSE635	Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE645	ASP resistant all ALL
GSE651	DNR resistant all ALL

Data table header descriptions
ID_REF	As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE	This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE	Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF	VALUE	DETECTION P-VALUE
1007_s_at	281.0	0.358690
1053_at	246.1	0.138765
117_at	257.6	0.107301
121_at	2158.1	0.000388
1255_g_at	216.6	0.458816
1294_at	916.2	0.001354
1316_at	394.1	0.017001
1320_at	30.5	0.872355
1405_i_at	24.3	0.937979
1431_at	231.5	0.081337
1438_at	144.0	0.500000
1487_at	408.5	0.302547
1494_f_at	182.4	0.250724
1598_g_at	1016.7	0.138765
160020_at	1023.3	0.031336
1729_at	109.1	0.732537
1773_at	341.2	0.138725
177_at	34.5	0.479380
179_at	1805.3	0.031336
1861_at	132.6	0.234557

Total number of rows: 22283

Table truncated, full table size 560 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM9786.CEL.gz	3.0 Mb	(ftp)(http)	CEL