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Sample GSM9799

Query DataSets for GSM9799

Status

Public on Aug 06, 2004

Title

nl115

Sample type

RNA

Source name

primary acute lymphoblastic leukemia cells

Organism

Homo sapiens

Extracted molecule

total RNA

Description

Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:104, Count:32
Corner- Avg:6715, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:31.037680,SFGene:All
Background:Avg:47.87,Stdev:0.85,Max:49.7,Min:45.7
Noise:Avg:1.67,Stdev:0.04,Max:1.8,Min:1.6
RawQ:2.15
Keywords = ALL
Lot batch =

Submission date

Sep 06, 2003

Last update date

May 28, 2005

Contact name

William E Evans

E-mail(s)

[email protected]

Phone

901-495-4995

Fax

901-495-6869

URL

http://www.stjude.org/leukemia/bio_evans.htm

Organization name

St.Jude Children's Research Hospital

Department

Pharmaceutical Sciences

Lab

Evans

Street address

332 N. Lauderdale St.

City

Memphis

State/province

ZIP/Postal code

38105

Country

USA

Platform ID

GPL96

Series (6)

More...

GSE635	Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE643	ASP sensitive all ALL
GSE650	DNR sensitive all ALL

Data table header descriptions
ID_REF	As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE	This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE	Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF	VALUE	DETECTION P-VALUE
1007_s_at	681.8	0.014937
1053_at	263.1	0.081337
117_at	329.6	0.234557
121_at	1187.2	0.006532
1255_g_at	131.2	0.418069
1294_at	797.1	0.000673
1316_at	339.1	0.098054
1320_at	147.7	0.541184
1405_i_at	75.4	0.635055
1431_at	51.2	0.520620
1438_at	345.9	0.218983
1487_at	389.4	0.320830
1494_f_at	265.8	0.127645
1598_g_at	679.1	0.081337
160020_at	641.5	0.107301
1729_at	358.1	0.081337
1773_at	296.6	0.066865
177_at	231.4	0.479380
179_at	1304.6	0.017001
1861_at	458.5	0.001602

Total number of rows: 22283

Table truncated, full table size 561 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM9799.CEL.gz	3.1 Mb	(ftp)(http)	CEL