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Sample GSM9849

Query DataSets for GSM9849

Status

Public on Aug 06, 2004

Title

nl165

Sample type

RNA

Source name

primary acute lymphoblastic leukemia cells

Organism

Homo sapiens

Extracted molecule

total RNA

Description

Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:39, Count:32
Corner- Avg:3394, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:37.776905,SFGene:All
Background:Avg:38.44,Stdev:1.04,Max:40.6,Min:35.7
Noise:Avg:1.28,Stdev:0.03,Max:1.4,Min:1.2
RawQ:1.67
Keywords = ALL
Lot batch =

Submission date

Sep 06, 2003

Last update date

May 28, 2005

Contact name

William E Evans

E-mail(s)

[email protected]

Phone

901-495-4995

Fax

901-495-6869

URL

http://www.stjude.org/leukemia/bio_evans.htm

Organization name

St.Jude Children's Research Hospital

Department

Pharmaceutical Sciences

Lab

Evans

Street address

332 N. Lauderdale St.

City

Memphis

State/province

ZIP/Postal code

38105

Country

USA

Platform ID

GPL96

Series (8)

More...

GSE635	Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE645	ASP resistant all ALL
GSE648	VCR sensitive all ALL

Data table header descriptions
ID_REF	As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE	This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE	Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF	VALUE	DETECTION P-VALUE
1007_s_at	463.8	0.127645
1053_at	425.9	0.006532
117_at	171.5	0.479380
121_at	1253.8	0.002228
1255_g_at	95.8	0.500000
1294_at	585.0	0.006532
1316_at	344.7	0.035163
1320_at	35.2	0.602006
1405_i_at	57.8	0.658380
1431_at	186.8	0.162935
1438_at	60.8	0.781017
1487_at	405.4	0.162935
1494_f_at	282.2	0.073830
1598_g_at	801.5	0.204022
160020_at	711.2	0.107301
1729_at	130.4	0.458816
1773_at	325.0	0.218983
177_at	172.5	0.175989
179_at	909.3	0.397994
1861_at	284.4	0.060419

Total number of rows: 22283

Table truncated, full table size 561 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM9849.CEL.gz	3.1 Mb	(ftp)(http)	CEL