NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM99004 Query DataSets for GSM99004
Status Public on Aug 31, 2006
Title H358 U133A run at UTSW
Sample type RNA
 
Source name NSCLC cell line
Organism Homo sapiens
Characteristics Test set
Extracted molecule total RNA
Extraction protocol Qiagen RNEasy, following standard protocol for cultured cells
Label biotin
Label protocol Approximately 5 micrograms of total RNA was processed to produce biotinylated cRNA targets using the older (ENZO) Affymetrix protocol
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures, using the Affy GCS3000
Description Baseline (unstimulated) cell line
Data processing RMA
 
Submission date Mar 06, 2006
Last update date Mar 06, 2006
Contact name Christopher D Coldren
E-mail(s) [email protected]
Phone 303 724 6056
Organization name University of Colorado School of Medicine
Department Medicine
Lab Pulmonary Sciences and Critical Care Medicine
Street address 12700 East 17th Place
City Aurora
State/province CO
ZIP/Postal code 80045
Country USA
 
Platform ID GPL96
Series (1)
GSE4342 Gefitinib sensitivity in NSCLC cell lines

Data table header descriptions
ID_REF Affymetrix probeset ID
VALUE RMA-calculated Signal intensity (log2)

Data table
ID_REF VALUE
1007_s_at 9.566022925
1053_at 7.630916251
117_at 7.523416448
121_at 10.15104771
1255_g_at 4.944382839
1294_at 7.554234357
1316_at 7.529539581
1320_at 6.223982357
1405_i_at 5.020805811
1431_at 4.62306446
1438_at 8.521040449
1487_at 8.518085718
1494_f_at 8.241148825
1598_g_at 10.13701651
160020_at 9.203486276
1729_at 7.971911092
177_at 6.543885695
1773_at 7.157402238
179_at 10.74165979
1861_at 6.972203528

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap